Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MIR6734-201ENST00000621166 68 ntBASIC1.83□□□□□ -2.12
SPTA1P02549 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.83□□□□□ -2.12
SPTA1P02549 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SPTA1P02549 Y_RNA.30-201ENST00000362572 97 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.82□□□□□ -2.12
SPTA1P02549 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.82□□□□□ -2.12
SPTA1P02549 AC093151.1-201ENST00000427711 313 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.82□□□□□ -2.12
SPTA1P02549 AP001804.3-201ENST00000525146 880 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SPTA1P02549 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.82□□□□□ -2.12
SPTA1P02549 AC093909.5-201ENST00000621839 1799 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 AL138799.3-201ENST00000438968 350 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 BX322784.1-201ENST00000455793 1077 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
SPTA1P02549 AC093331.1-201ENST00000521474 169 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.82□□□□□ -2.12
SPTA1P02549 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.82□□□□□ -2.12
SPTA1P02549 AC073387.2-201ENST00000604797 784 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 AC012360.2-201ENST00000609349 391 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 Y_RNA.783-201ENST00000613546 102 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 AP006248.2-201ENST00000623309 592 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 AC245100.2-201ENST00000454544 1679 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.82□□□□□ -2.12
SPTA1P02549 AL139811.1-201ENST00000424779 2299 ntBASIC1.82□□□□□ -2.12
SPTA1P02549 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SPTA1P02549 AC004965.1-201ENST00000413033 213 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 AL049830.2-201ENST00000480072 201 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.81□□□□□ -2.12
SPTA1P02549 AC084035.1-201ENST00000634543 607 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 AL356489.2-201ENST00000566968 3528 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 MTND4P35-201ENST00000604257 1375 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SPTA1P02549 EI24P1-201ENST00000416584 867 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 RPS7P2-201ENST00000435134 607 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.81□□□□□ -2.12
SPTA1P02549 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.81□□□□□ -2.12
SPTA1P02549 RNA5SP76-201ENST00000516277 87 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 AP000889.2-201ENST00000532684 490 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 AC110588.1-201ENST00000559699 137 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.81□□□□□ -2.12
SPTA1P02549 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.81□□□□□ -2.12
SPTA1P02549 PVT1_3.1-201ENST00000620853 95 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 AC074140.1-201ENST00000621617 208 ntBASIC1.81□□□□□ -2.12
SPTA1P02549 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.81□□□□□ -2.12
SPTA1P02549 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
SPTA1P02549 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SPTA1P02549 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SPTA1P02549 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SPTA1P02549 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
SPTA1P02549 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.8□□□□□ -2.12
SPTA1P02549 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.8□□□□□ -2.12
SPTA1P02549 AC068305.1-201ENST00000497406 726 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 TTC39CP1-201ENST00000512513 755 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SPTA1P02549 AL137072.1-201ENST00000603444 466 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 AF127577.6-201ENST00000623352 2191 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 RAD1P1-201ENST00000231383 813 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 RPL23AP39-201ENST00000415533 405 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 AC012498.1-201ENST00000424037 437 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.8□□□□□ -2.12
SPTA1P02549 AL445669.2-201ENST00000454425 421 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 SNORD13-201ENST00000459299 104 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 POU5F1P7-201ENST00000508759 541 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 AP001207.1-201ENST00000524051 481 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 AC087441.2-201ENST00000529141 262 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.8□□□□□ -2.12
SPTA1P02549 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.8□□□□□ -2.12
SPTA1P02549 NF1P5-201ENST00000588287 448 ntBASIC1.8□□□□□ -2.12
SPTA1P02549 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.8□□□□□ -2.12
SPTA1P02549 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.8□□□□□ -2.12
SPTA1P02549 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.8□□□□□ -2.12
SPTA1P02549 AL035405.1-201ENST00000400795 710 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 AL512430.2-201ENST00000406786 339 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 AL513321.1-201ENST00000441175 761 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.79□□□□□ -2.12
SPTA1P02549 AC104564.1-201ENST00000493028 407 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.79□□□□□ -2.12
SPTA1P02549 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.79□□□□□ -2.12
SPTA1P02549 AP001005.3-201ENST00000622049 129 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SPTA1P02549 AC092326.2-201ENST00000624772 1561 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.79□□□□□ -2.12
SPTA1P02549 Z82195.2-201ENST00000612348 18351 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SPTA1P02549 WWP1P1-201ENST00000466609 2769 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 U8.8-201ENST00000365399 135 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 SNORD114-22-201ENST00000365423 72 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 AC027124.2-201ENST00000428249 105 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SPTA1P02549 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.79□□□□□ -2.12
SPTA1P02549 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.79□□□□□ -2.12
SPTA1P02549 AC244517.12-201ENST00000623581 663 ntBASIC1.79□□□□□ -2.12
SPTA1P02549 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.79□□□□□ -2.12
SPTA1P02549 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.79□□□□□ -2.12
SPTA1P02549 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SPTA1P02549 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.78□□□□□ -2.12
SPTA1P02549 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms