Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 PSMA2P3-201ENST00000429685 675 ntBASIC2.16□□□□□ -2.06
TNFP01375 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.16□□□□□ -2.06
TNFP01375 AC092427.1-202ENST00000430569 476 ntBASIC2.16□□□□□ -2.06
TNFP01375 CR769767.1-201ENST00000436337 346 ntBASIC2.16□□□□□ -2.06
TNFP01375 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFP01375 AL031663.1-201ENST00000437445 219 ntBASIC2.16□□□□□ -2.06
TNFP01375 HSFY3P-201ENST00000444242 1191 ntBASIC2.16□□□□□ -2.06
TNFP01375 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFP01375 AL109741.2-201ENST00000455561 343 ntBASIC2.16□□□□□ -2.06
TNFP01375 UBL5P3-201ENST00000475112 231 ntBASIC2.16□□□□□ -2.06
TNFP01375 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TNFP01375 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFP01375 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFP01375 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.16□□□□□ -2.06
TNFP01375 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.16□□□□□ -2.06
TNFP01375 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.16□□□□□ -2.06
TNFP01375 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
TNFP01375 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.16□□□□□ -2.06
TNFP01375 AP000916.1-201ENST00000533869 835 ntBASIC2.16□□□□□ -2.06
TNFP01375 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.16□□□□□ -2.06
TNFP01375 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFP01375 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFP01375 MIR5194-201ENST00000582634 120 ntBASIC2.16□□□□□ -2.06
TNFP01375 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.16□□□□□ -2.06
TNFP01375 AC068313.1-201ENST00000604028 1008 ntBASIC2.16□□□□□ -2.06
TNFP01375 AC019159.1-201ENST00000605094 187 ntBASIC2.16□□□□□ -2.06
TNFP01375 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFP01375 AC009831.4-201ENST00000620744 325 ntBASIC2.16□□□□□ -2.06
TNFP01375 AC110994.2-201ENST00000635481 492 ntBASIC2.16□□□□□ -2.06
TNFP01375 MIR219B-201ENST00000637023 88 ntBASIC2.16□□□□□ -2.06
TNFP01375 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TNFP01375 ZNF271P-202ENST00000465539 1970 ntBASIC2.16□□□□□ -2.06
TNFP01375 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TNFP01375 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TNFP01375 RNU6-1180P-201ENST00000364935 107 ntBASIC2.15□□□□□ -2.07
TNFP01375 OR5H15-201ENST00000383696 930 ntBASIC2.15□□□□□ -2.07
TNFP01375 BX276092.3-201ENST00000424182 230 ntBASIC2.15□□□□□ -2.07
TNFP01375 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.15□□□□□ -2.07
TNFP01375 Z98742.2-201ENST00000431564 187 ntBASIC2.15□□□□□ -2.07
TNFP01375 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.15□□□□□ -2.07
TNFP01375 AC129850.1-201ENST00000436203 508 ntBASIC2.15□□□□□ -2.07
TNFP01375 WASF1P1-201ENST00000447560 1131 ntBASIC2.15□□□□□ -2.07
TNFP01375 AC009961.3-201ENST00000449832 765 ntBASIC2.15□□□□□ -2.07
TNFP01375 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.15□□□□□ -2.07
TNFP01375 RPS27P27-201ENST00000498779 255 ntBASIC2.15□□□□□ -2.07
TNFP01375 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.15□□□□□ -2.07
TNFP01375 RNA5SP468-201ENST00000516782 93 ntBASIC2.15□□□□□ -2.07
TNFP01375 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFP01375 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.15□□□□□ -2.07
TNFP01375 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.15□□□□□ -2.07
TNFP01375 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.15□□□□□ -2.07
TNFP01375 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TNFP01375 SNORA64-201ENST00000384674 134 ntBASIC2.14□□□□□ -2.07
TNFP01375 RNA5SP181-201ENST00000410246 98 ntBASIC2.14□□□□□ -2.07
TNFP01375 RNU4-65P-201ENST00000410473 140 ntBASIC2.14□□□□□ -2.07
TNFP01375 ATP5F1P1-201ENST00000433775 569 ntBASIC2.14□□□□□ -2.07
TNFP01375 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFP01375 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.14□□□□□ -2.07
TNFP01375 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFP01375 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFP01375 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFP01375 SCARNA16.3-201ENST00000516595 184 ntBASIC2.14□□□□□ -2.07
TNFP01375 HSPE1P18-201ENST00000517602 280 ntBASIC2.14□□□□□ -2.07
TNFP01375 AC109635.4-202ENST00000531666 412 ntBASIC2.14□□□□□ -2.07
TNFP01375 OSBPL9P3-201ENST00000534523 595 ntBASIC2.14□□□□□ -2.07
TNFP01375 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TNFP01375 YWHAZP1-201ENST00000556286 722 ntBASIC2.14□□□□□ -2.07
TNFP01375 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFP01375 AC012182.1-201ENST00000570133 895 ntBASIC2.14□□□□□ -2.07
TNFP01375 AL158827.2-201ENST00000602494 330 ntBASIC2.14□□□□□ -2.07
TNFP01375 AL049779.4-201ENST00000604500 156 ntBASIC2.14□□□□□ -2.07
TNFP01375 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TNFP01375 AC015726.3-201ENST00000624501 418 ntBASIC2.14□□□□□ -2.07
TNFP01375 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TNFP01375 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFP01375 AL691447.3-201ENST00000635020 330 ntBASIC2.14□□□□□ -2.07
TNFP01375 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TNFP01375 AC138915.1-201ENST00000565427 1685 ntBASIC2.14□□□□□ -2.07
TNFP01375 AC008432.1-201ENST00000615912 1320 ntBASIC2.14□□□□□ -2.07
TNFP01375 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.14□□□□□ -2.07
TNFP01375 MAPK10-266ENST00000641066 6555 ntBASIC2.13□□□□□ -2.07
TNFP01375 RNU6-1181P-201ENST00000384191 106 ntBASIC2.13□□□□□ -2.07
TNFP01375 MIR504-201ENST00000385065 83 ntBASIC2.13□□□□□ -2.07
TNFP01375 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
TNFP01375 AL137014.1-201ENST00000420490 1226 ntBASIC2.13□□□□□ -2.07
TNFP01375 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.13□□□□□ -2.07
TNFP01375 SNRPEP4-201ENST00000435815 279 ntBASIC2.13□□□□□ -2.07
TNFP01375 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.13□□□□□ -2.07
TNFP01375 LSM1P1-201ENST00000438629 273 ntBASIC2.13□□□□□ -2.07
TNFP01375 AC234775.1-201ENST00000454247 670 ntBASIC2.13□□□□□ -2.07
TNFP01375 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.13□□□□□ -2.07
TNFP01375 AC107222.1-201ENST00000510899 637 ntBASIC2.13□□□□□ -2.07
TNFP01375 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.13□□□□□ -2.07
TNFP01375 RN7SKP277-201ENST00000516895 283 ntBASIC2.13□□□□□ -2.07
TNFP01375 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.13□□□□□ -2.07
TNFP01375 AC087373.1-201ENST00000524920 491 ntBASIC2.13□□□□□ -2.07
TNFP01375 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TNFP01375 AL133507.1-201ENST00000605269 557 ntBASIC2.13□□□□□ -2.07
TNFP01375 AL590282.1-201ENST00000610379 1136 ntBASIC2.13□□□□□ -2.07
TNFP01375 TUG1_1.1-201ENST00000610654 145 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms