Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 CKS1BP5-201ENST00000434172 273 ntBASIC3.73□□□□□ -1.81
LDLRP01130 EEF1E1P1-201ENST00000446998 430 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.73□□□□□ -1.81
LDLRP01130 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.73□□□□□ -1.81
LDLRP01130 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.73□□□□□ -1.81
LDLRP01130 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.73□□□□□ -1.81
LDLRP01130 AC093899.1-201ENST00000457984 376 ntBASIC3.73□□□□□ -1.81
LDLRP01130 SRRM1P2-201ENST00000464531 1192 ntBASIC3.73□□□□□ -1.81
LDLRP01130 RPL7P1-201ENST00000468161 747 ntBASIC3.73□□□□□ -1.81
LDLRP01130 RPL7P9-201ENST00000468715 747 ntBASIC3.73□□□□□ -1.81
LDLRP01130 TMED11P-201ENST00000479478 690 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AC110792.1-201ENST00000491826 472 ntBASIC3.73□□□□□ -1.81
LDLRP01130 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.73□□□□□ -1.81
LDLRP01130 AC114981.1-201ENST00000503897 678 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.73□□□□□ -1.81
LDLRP01130 AC112198.1-201ENST00000505369 1220 ntBASIC3.73□□□□□ -1.81
LDLRP01130 LTV1P1-201ENST00000510683 1237 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AC021146.1-201ENST00000511202 716 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AC023141.12-201ENST00000512399 199 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AC006499.2-201ENST00000513470 337 ntBASIC3.73□□□□□ -1.81
LDLRP01130 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.73□□□□□ -1.81
LDLRP01130 AC022447.1-201ENST00000515358 464 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.73□□□□□ -1.81
LDLRP01130 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.73□□□□□ -1.81
LDLRP01130 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.73□□□□□ -1.81
LDLRP01130 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.73□□□□□ -1.81
LDLRP01130 AC239860.2-201ENST00000525886 270 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AL139174.1-201ENST00000531489 886 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AP004242.1-201ENST00000533701 349 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.73□□□□□ -1.81
LDLRP01130 CENPUP2-201ENST00000555897 1186 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.73□□□□□ -1.81
LDLRP01130 AC025627.2-201ENST00000576220 160 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.73□□□□□ -1.81
LDLRP01130 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.73□□□□□ -1.81
LDLRP01130 MIR5684-201ENST00000585074 65 ntBASIC3.73□□□□□ -1.81
LDLRP01130 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LDLRP01130 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.73□□□□□ -1.81
LDLRP01130 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.73□□□□□ -1.81
LDLRP01130 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.73□□□□□ -1.81
LDLRP01130 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.73□□□□□ -1.81
LDLRP01130 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AC092794.1-201ENST00000612734 582 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AC018755.4-201ENST00000619715 454 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AL603839.4-201ENST00000624658 1005 ntBASIC3.73□□□□□ -1.81
LDLRP01130 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.73□□□□□ -1.81
LDLRP01130 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.73□□□□□ -1.81
LDLRP01130 AC116667.1-201ENST00000604855 2072 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AC073346.2-201ENST00000624724 2058 ntBASIC3.73□□□□□ -1.81
LDLRP01130 MTCO1P23-201ENST00000415223 1526 ntBASIC3.73□□□□□ -1.81
LDLRP01130 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.73□□□□□ -1.81
LDLRP01130 GABPAP-201ENST00000419271 1356 ntBASIC3.73□□□□□ -1.81
LDLRP01130 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LDLRP01130 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LDLRP01130 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDLRP01130 GDI2P1-201ENST00000429312 1336 ntBASIC3.72□□□□□ -1.81
LDLRP01130 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDLRP01130 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.72□□□□□ -1.81
LDLRP01130 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDLRP01130 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LDLRP01130 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDLRP01130 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDLRP01130 Y_RNA.3-201ENST00000362331 103 ntBASIC3.72□□□□□ -1.81
LDLRP01130 SNORD6-201ENST00000365444 73 ntBASIC3.72□□□□□ -1.81
LDLRP01130 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDLRP01130 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LDLRP01130 Y_RNA.553-201ENST00000384670 102 ntBASIC3.72□□□□□ -1.81
LDLRP01130 MT-TC-201ENST00000387405 66 ntBASIC3.72□□□□□ -1.81
LDLRP01130 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.72□□□□□ -1.81
LDLRP01130 Z98941.1-201ENST00000407764 100 ntBASIC3.72□□□□□ -1.81
LDLRP01130 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.72□□□□□ -1.81
LDLRP01130 RNU4-6P-201ENST00000410804 122 ntBASIC3.72□□□□□ -1.81
LDLRP01130 ELOCP17-201ENST00000414751 326 ntBASIC3.72□□□□□ -1.81
LDLRP01130 NPM1P11-201ENST00000417106 855 ntBASIC3.72□□□□□ -1.81
LDLRP01130 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AL049610.1-201ENST00000423374 372 ntBASIC3.72□□□□□ -1.81
LDLRP01130 MTCYBP5-201ENST00000423752 1135 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AC005517.2-201ENST00000424673 553 ntBASIC3.72□□□□□ -1.81
LDLRP01130 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.72□□□□□ -1.81
LDLRP01130 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.72□□□□□ -1.81
LDLRP01130 AC091286.1-201ENST00000431233 461 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.72□□□□□ -1.81
LDLRP01130 SKP1P1-201ENST00000438081 489 ntBASIC3.72□□□□□ -1.81
LDLRP01130 MTATP6P23-201ENST00000440153 476 ntBASIC3.72□□□□□ -1.81
LDLRP01130 RPL23AP33-201ENST00000442301 452 ntBASIC3.72□□□□□ -1.81
LDLRP01130 MTCO1P19-201ENST00000443487 500 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.72□□□□□ -1.81
LDLRP01130 SNORA59A-201ENST00000459326 152 ntBASIC3.72□□□□□ -1.81
LDLRP01130 MEMO1P3-201ENST00000459811 302 ntBASIC3.72□□□□□ -1.81
LDLRP01130 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.72□□□□□ -1.81
LDLRP01130 AC072039.1-201ENST00000477611 581 ntBASIC3.72□□□□□ -1.81
LDLRP01130 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.72□□□□□ -1.81
LDLRP01130 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.72□□□□□ -1.81
LDLRP01130 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.72□□□□□ -1.81
LDLRP01130 RNU6-678P-201ENST00000516832 109 ntBASIC3.72□□□□□ -1.81
LDLRP01130 NDUFA5P2-201ENST00000519723 344 ntBASIC3.72□□□□□ -1.81
LDLRP01130 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
LDLRP01130 AC060788.1-201ENST00000521318 469 ntBASIC3.72□□□□□ -1.81
LDLRP01130 MTCYBP41-201ENST00000528913 1123 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms