Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
RNF40O75150 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
RNF40O75150 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
RNF40O75150 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 RPL19P1-201ENST00000411635 428 ntBASIC6.43□□□□□ -1.38
RNF40O75150 BX842559.1-201ENST00000419615 532 ntBASIC6.43□□□□□ -1.38
RNF40O75150 CHEK2P5-201ENST00000423877 246 ntBASIC6.43□□□□□ -1.38
RNF40O75150 BX679664.1-201ENST00000434429 253 ntBASIC6.43□□□□□ -1.38
RNF40O75150 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF40O75150 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF40O75150 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF40O75150 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF40O75150 AC104164.1-201ENST00000460282 590 ntBASIC6.43□□□□□ -1.38
RNF40O75150 AC022034.3-201ENST00000471393 478 ntBASIC6.43□□□□□ -1.38
RNF40O75150 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF40O75150 HMGN2P13-201ENST00000476476 274 ntBASIC6.43□□□□□ -1.38
RNF40O75150 AC106800.3-201ENST00000511389 308 ntBASIC6.43□□□□□ -1.38
RNF40O75150 AC007016.1-201ENST00000512110 244 ntBASIC6.43□□□□□ -1.38
RNF40O75150 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF40O75150 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF40O75150 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.43□□□□□ -1.38
RNF40O75150 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF40O75150 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF40O75150 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.43□□□□□ -1.38
RNF40O75150 AC174048.1-201ENST00000603389 144 ntBASIC6.43□□□□□ -1.38
RNF40O75150 RNU6-85P-201ENST00000605989 107 ntBASIC6.43□□□□□ -1.38
RNF40O75150 MIR6886-201ENST00000619864 61 ntBASIC6.43□□□□□ -1.38
RNF40O75150 AC007998.5-201ENST00000622938 237 ntBASIC6.43□□□□□ -1.38
RNF40O75150 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
RNF40O75150 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RNF40O75150 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF40O75150 PWAR1-201ENST00000624188 2414 ntBASIC6.42□□□□□ -1.38
RNF40O75150 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF40O75150 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF40O75150 AC090740.1-201ENST00000623193 2262 ntBASIC6.42□□□□□ -1.38
RNF40O75150 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF40O75150 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
RNF40O75150 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF40O75150 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
RNF40O75150 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
RNF40O75150 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
RNF40O75150 ZNF299P-201ENST00000406845 1804 ntBASIC6.42□□□□□ -1.38
RNF40O75150 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF40O75150 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
RNF40O75150 RNU6-701P-201ENST00000384059 107 ntBASIC6.42□□□□□ -1.38
RNF40O75150 SNORA53-201ENST00000391141 249 ntBASIC6.42□□□□□ -1.38
RNF40O75150 RN7SKP229-201ENST00000410465 302 ntBASIC6.42□□□□□ -1.38
RNF40O75150 RNU6-325P-201ENST00000411132 105 ntBASIC6.42□□□□□ -1.38
RNF40O75150 AC073063.1-201ENST00000434352 607 ntBASIC6.42□□□□□ -1.38
RNF40O75150 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF40O75150 AC127537.2-201ENST00000439258 465 ntBASIC6.42□□□□□ -1.38
RNF40O75150 Z95327.1-201ENST00000446082 482 ntBASIC6.42□□□□□ -1.38
RNF40O75150 RN7SL326P-201ENST00000477493 296 ntBASIC6.42□□□□□ -1.38
RNF40O75150 PPIAP19-201ENST00000486414 492 ntBASIC6.42□□□□□ -1.38
RNF40O75150 Y_RNA.689-201ENST00000516589 107 ntBASIC6.42□□□□□ -1.38
RNF40O75150 RNA5SP271-201ENST00000516700 88 ntBASIC6.42□□□□□ -1.38
RNF40O75150 AC069113.1-201ENST00000517763 267 ntBASIC6.42□□□□□ -1.38
RNF40O75150 AC130365.2-201ENST00000525882 1201 ntBASIC6.42□□□□□ -1.38
RNF40O75150 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF40O75150 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF40O75150 AL078605.1-201ENST00000603529 500 ntBASIC6.42□□□□□ -1.38
RNF40O75150 AL022394.1-201ENST00000606979 292 ntBASIC6.42□□□□□ -1.38
RNF40O75150 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.42□□□□□ -1.38
RNF40O75150 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF40O75150 AC034102.8-201ENST00000615146 484 ntBASIC6.42□□□□□ -1.38
RNF40O75150 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF40O75150 FP236240.3-201ENST00000623061 327 ntBASIC6.42□□□□□ -1.38
RNF40O75150 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF40O75150 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF40O75150 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF40O75150 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
RNF40O75150 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
RNF40O75150 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF40O75150 AC024651.2-201ENST00000562480 2098 ntBASIC6.41□□□□□ -1.38
RNF40O75150 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF40O75150 AC116158.1-201ENST00000560231 2129 ntBASIC6.41□□□□□ -1.38
RNF40O75150 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC6.41□□□□□ -1.38
RNF40O75150 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF40O75150 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF40O75150 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF40O75150 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF40O75150 U8.8-201ENST00000365399 135 ntBASIC6.41□□□□□ -1.38
RNF40O75150 Y_RNA.439-201ENST00000384119 94 ntBASIC6.41□□□□□ -1.38
RNF40O75150 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF40O75150 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF40O75150 AL159987.2-201ENST00000432754 307 ntBASIC6.41□□□□□ -1.38
RNF40O75150 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF40O75150 NXT1P1-201ENST00000458481 316 ntBASIC6.41□□□□□ -1.38
RNF40O75150 AC007998.1-201ENST00000474156 672 ntBASIC6.41□□□□□ -1.38
RNF40O75150 SNORD46.2-201ENST00000516021 102 ntBASIC6.41□□□□□ -1.38
RNF40O75150 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF40O75150 AC087369.1-201ENST00000520775 996 ntBASIC6.41□□□□□ -1.38
RNF40O75150 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms