Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC244517.1-201ENST00000606030 2086 ntBASIC4.64□□□□□ -1.67
CTNND1O60716 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTNND1O60716 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.64□□□□□ -1.67
CTNND1O60716 TEX21P-201ENST00000447107 1476 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CTNND1O60716 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTNND1O60716 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CTNND1O60716 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTNND1O60716 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTNND1O60716 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CTNND1O60716 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.63□□□□□ -1.67
CTNND1O60716 SNORD74.4-201ENST00000364129 80 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 OR5H15-201ENST00000383696 930 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 U1.1-201ENST00000384101 164 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 SNORA5A-201ENST00000384111 134 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 SNORD115.1-201ENST00000391109 76 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CTNND1O60716 DEFB108C-201ENST00000400154 252 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AL583834.1-201ENST00000406943 343 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 Y_RNA.608-201ENST00000410647 95 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 RNU2-47P-201ENST00000410649 186 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AL663109.1-201ENST00000411498 844 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AL359704.1-201ENST00000411586 781 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CTNND1O60716 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.63□□□□□ -1.67
CTNND1O60716 AC091286.1-201ENST00000431233 461 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 MTND4LP10-201ENST00000435146 291 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 UBE2V1P13-201ENST00000436983 439 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.63□□□□□ -1.67
CTNND1O60716 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CTNND1O60716 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.63□□□□□ -1.67
CTNND1O60716 AC112653.1-201ENST00000443851 386 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 Z82190.1-201ENST00000454534 490 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.63□□□□□ -1.67
CTNND1O60716 SNORD121B-201ENST00000458838 81 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 SNORD42A-201ENST00000459584 64 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.63□□□□□ -1.67
CTNND1O60716 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTNND1O60716 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTNND1O60716 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.63□□□□□ -1.67
CTNND1O60716 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.63□□□□□ -1.67
CTNND1O60716 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.63□□□□□ -1.67
CTNND1O60716 CYP4A43P-201ENST00000568156 121 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AC090616.5-202ENST00000582111 297 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 BNIP3P8-201ENST00000597863 560 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 HMGN2P28-201ENST00000606102 262 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.63□□□□□ -1.67
CTNND1O60716 AC138749.5-201ENST00000611461 208 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTNND1O60716 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.63□□□□□ -1.67
CTNND1O60716 AC116165.2-201ENST00000616705 206 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AL356585.4-201ENST00000623078 1229 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AC067931.1-201ENST00000624190 671 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 AC009093.8-201ENST00000641769 292 ntBASIC4.63□□□□□ -1.67
CTNND1O60716 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CTNND1O60716 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.63□□□□□ -1.67
CTNND1O60716 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTNND1O60716 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTNND1O60716 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CTNND1O60716 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.63□□□□□ -1.67
CTNND1O60716 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
CTNND1O60716 AC024560.2-201ENST00000507981 1497 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTNND1O60716 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
CTNND1O60716 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.62□□□□□ -1.67
CTNND1O60716 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CTNND1O60716 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTNND1O60716 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CTNND1O60716 AC092125.1-201ENST00000562568 1995 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 AC011266.1-201ENST00000624119 3569 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTNND1O60716 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTNND1O60716 FRG1BP-201ENST00000278882 761 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.62□□□□□ -1.67
CTNND1O60716 SNORA40.3-201ENST00000390964 122 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 RPL21P17-201ENST00000397467 475 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 RPS20P2-201ENST00000402520 389 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 HMGN1P14-201ENST00000412459 517 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 AC007899.1-201ENST00000412776 775 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 SYF2P2-201ENST00000417620 583 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.62□□□□□ -1.67
CTNND1O60716 RPL22P17-201ENST00000438729 315 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 NDUFS5P3-201ENST00000450668 321 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 PRSS3P4-201ENST00000453323 162 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.62□□□□□ -1.67
CTNND1O60716 AL645939.1-201ENST00000453429 797 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 AL033528.1-201ENST00000453780 140 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 AC104308.1-201ENST00000454621 333 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.62□□□□□ -1.67
CTNND1O60716 RPL21P11-201ENST00000461458 483 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.62□□□□□ -1.67
CTNND1O60716 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.62□□□□□ -1.67
CTNND1O60716 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.62□□□□□ -1.67
CTNND1O60716 AP003497.1-201ENST00000528472 562 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 AP002453.2-201ENST00000533503 320 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.62□□□□□ -1.67
CTNND1O60716 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.62□□□□□ -1.67
CTNND1O60716 AC022968.1-201ENST00000567372 442 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 AC009101.1-201ENST00000568135 242 ntBASIC4.62□□□□□ -1.67
CTNND1O60716 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms