Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AP000907.2-201ENST00000530827 353 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.55□□□□□ -1.52
GRIN3BO60391 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.55□□□□□ -1.52
GRIN3BO60391 OR4T1P-201ENST00000554933 911 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 TVP23BP1-201ENST00000557500 617 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 MIR3146-201ENST00000580367 79 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 MIR4795-201ENST00000584182 89 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.55□□□□□ -1.52
GRIN3BO60391 AC135507.2-201ENST00000612443 309 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 AL442067.2-201ENST00000614033 363 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
GRIN3BO60391 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GRIN3BO60391 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
GRIN3BO60391 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.55□□□□□ -1.52
GRIN3BO60391 AC105074.1-201ENST00000623380 3095 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 AL158163.1-201ENST00000603915 1649 ntBASIC5.55□□□□□ -1.52
GRIN3BO60391 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
GRIN3BO60391 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GRIN3BO60391 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GRIN3BO60391 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GRIN3BO60391 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GRIN3BO60391 SAMMSON-213ENST00000641336 1521 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.54□□□□□ -1.52
GRIN3BO60391 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
GRIN3BO60391 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
GRIN3BO60391 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GRIN3BO60391 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
GRIN3BO60391 RNA5SP258-201ENST00000362750 119 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 Y_RNA.162-201ENST00000363683 102 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.54□□□□□ -1.52
GRIN3BO60391 RPL21P65-201ENST00000406094 466 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 Z92545.1-201ENST00000411782 234 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.54□□□□□ -1.52
GRIN3BO60391 AF228730.4-201ENST00000421457 183 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 RPL36AP53-201ENST00000432891 316 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.54□□□□□ -1.52
GRIN3BO60391 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.54□□□□□ -1.52
GRIN3BO60391 MTND4P19-201ENST00000446659 478 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 DHFRP3-201ENST00000455595 559 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.54□□□□□ -1.52
GRIN3BO60391 snoU13.7-201ENST00000459220 104 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 AP001992.1-205ENST00000462248 379 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 AC055855.1-201ENST00000489563 579 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.54□□□□□ -1.52
GRIN3BO60391 OR5B19P-201ENST00000531766 928 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.54□□□□□ -1.52
GRIN3BO60391 AC107016.1-201ENST00000550463 337 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.54□□□□□ -1.52
GRIN3BO60391 AC087477.6-201ENST00000559595 843 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 AL132765.2-201ENST00000610812 351 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 AC090574.1-201ENST00000623186 233 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GRIN3BO60391 MAPK10-320ENST00000641462 6696 ntBASIC5.54□□□□□ -1.52
GRIN3BO60391 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GRIN3BO60391 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
GRIN3BO60391 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GRIN3BO60391 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
GRIN3BO60391 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GRIN3BO60391 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.53□□□□□ -1.52
GRIN3BO60391 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GRIN3BO60391 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AL592182.3-201ENST00000642132 3304 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
GRIN3BO60391 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.53□□□□□ -1.52
GRIN3BO60391 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GRIN3BO60391 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.53□□□□□ -1.52
GRIN3BO60391 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AC073136.1-201ENST00000449426 2884 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 MIR331-201ENST00000362302 94 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 RNA5SP130-201ENST00000364431 114 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 SNORA51.2-201ENST00000364595 132 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 RNY4P16-201ENST00000364768 94 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 RNA5SP187-201ENST00000384400 119 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 U3.20-201ENST00000390909 217 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 FAT1P1-201ENST00000406588 507 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 RNU6-1068P-201ENST00000410958 103 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AC108032.1-201ENST00000416706 207 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AC007283.2-201ENST00000424739 197 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.53□□□□□ -1.52
GRIN3BO60391 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.53□□□□□ -1.52
GRIN3BO60391 TAAR7P-201ENST00000436141 242 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 RPS15AP9-201ENST00000439856 381 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AC114495.1-201ENST00000441274 436 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.53□□□□□ -1.52
GRIN3BO60391 HMGN1P13-201ENST00000505795 138 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.53□□□□□ -1.52
GRIN3BO60391 RNA5SP337-201ENST00000517007 109 ntBASIC5.53□□□□□ -1.52
GRIN3BO60391 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.53□□□□□ -1.52
GRIN3BO60391 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms