Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMARCA5O60264 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.42□□□□□ -1.54
SMARCA5O60264 AC092435.4-201ENST00000623012 4159 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMARCA5O60264 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.41□□□□□ -1.54
SMARCA5O60264 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.41□□□□□ -1.54
SMARCA5O60264 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMARCA5O60264 RNA5SP447-201ENST00000363749 119 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 RNU6-534P-201ENST00000364877 106 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 SNORA56-201ENST00000383966 129 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 RNU6-629P-201ENST00000384061 103 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 MIR1911-201ENST00000410783 80 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 RPL37P18-201ENST00000411602 243 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 FTH1P6-201ENST00000430768 320 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.41□□□□□ -1.54
SMARCA5O60264 AL451074.3-201ENST00000437709 472 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.41□□□□□ -1.54
SMARCA5O60264 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.41□□□□□ -1.54
SMARCA5O60264 FAM103A2P-201ENST00000444122 354 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 AC104308.1-201ENST00000454621 333 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 snoU13.24-201ENST00000458998 104 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 HMGN1P12-201ENST00000499125 195 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 AF131216.2-201ENST00000512316 564 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.41□□□□□ -1.54
SMARCA5O60264 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.41□□□□□ -1.54
SMARCA5O60264 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.41□□□□□ -1.54
SMARCA5O60264 AP005639.2-201ENST00000527592 928 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.41□□□□□ -1.54
SMARCA5O60264 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.41□□□□□ -1.54
SMARCA5O60264 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.41□□□□□ -1.54
SMARCA5O60264 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.41□□□□□ -1.54
SMARCA5O60264 AC019193.2-201ENST00000610012 634 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 AL590282.1-201ENST00000610379 1136 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.41□□□□□ -1.54
SMARCA5O60264 AC007546.1-201ENST00000619452 559 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 AC010338.1-201ENST00000621823 717 ntBASIC5.41□□□□□ -1.54
SMARCA5O60264 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMARCA5O60264 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SMARCA5O60264 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
SMARCA5O60264 AC139713.2-215ENST00000641428 5037 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 AL645937.1-201ENST00000641739 1652 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
SMARCA5O60264 OR51H2P-202ENST00000641424 3046 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SMARCA5O60264 MTCO1P9-201ENST00000505577 1534 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMARCA5O60264 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SMARCA5O60264 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMARCA5O60264 FRG1BP-201ENST00000278882 761 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 Y_RNA.402-201ENST00000383972 102 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMARCA5O60264 RPS3AP36-201ENST00000398190 775 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 SNORA74C-2-201ENST00000411179 201 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.4□□□□□ -1.54
SMARCA5O60264 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.4□□□□□ -1.54
SMARCA5O60264 AL356387.2-201ENST00000422272 243 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 RPL23AP52-201ENST00000439311 478 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 AC114495.1-201ENST00000441274 436 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.4□□□□□ -1.54
SMARCA5O60264 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 SNRPGP5-201ENST00000456003 220 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 snoU13.1-201ENST00000459157 104 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 RPL38P1-201ENST00000460914 211 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 AC010285.1-201ENST00000470580 392 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 AC108022.1-201ENST00000493466 478 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 RPL7P23-201ENST00000493874 747 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 AL139099.1-201ENST00000497398 403 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 HMGB1P22-201ENST00000505315 124 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.4□□□□□ -1.54
SMARCA5O60264 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.4□□□□□ -1.54
SMARCA5O60264 TRAV8-5-201ENST00000537369 341 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.4□□□□□ -1.54
SMARCA5O60264 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.4□□□□□ -1.54
SMARCA5O60264 MIR5697-201ENST00000578045 78 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SMARCA5O60264 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.4□□□□□ -1.54
SMARCA5O60264 AL020991.1-201ENST00000612314 373 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 AL592295.2-201ENST00000612578 206 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 AC009237.17-201ENST00000618111 748 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 AC093591.3-201ENST00000634516 308 ntBASIC5.4□□□□□ -1.54
SMARCA5O60264 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SMARCA5O60264 AC009902.3-201ENST00000606235 2172 ntBASIC5.4□□□□□ -1.55
SMARCA5O60264 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.4□□□□□ -1.55
SMARCA5O60264 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SMARCA5O60264 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.4□□□□□ -1.55
SMARCA5O60264 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.4□□□□□ -1.55
SMARCA5O60264 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMARCA5O60264 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMARCA5O60264 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.39□□□□□ -1.55
SMARCA5O60264 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMARCA5O60264 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMARCA5O60264 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMARCA5O60264 AC067945.1-201ENST00000342609 618 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SMARCA5O60264 Y_RNA.89-201ENST00000363031 102 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 Y_RNA.160-201ENST00000363677 92 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 Y_RNA.295-201ENST00000364918 102 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 Y_RNA.296-201ENST00000364930 108 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 MIR3065-201ENST00000390137 79 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms