Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC007389.2-201ENST00000434630 306 ntBASIC3.52□□□□□ -1.85
SSX4O60224 MTND2P22-201ENST00000444325 1033 ntBASIC3.52□□□□□ -1.85
SSX4O60224 RPS29P31-201ENST00000446147 164 ntBASIC3.52□□□□□ -1.85
SSX4O60224 VN1R34P-201ENST00000447387 883 ntBASIC3.52□□□□□ -1.85
SSX4O60224 RPS27AP8-201ENST00000452665 445 ntBASIC3.52□□□□□ -1.85
SSX4O60224 KATNBL1P6-201ENST00000453433 915 ntBASIC3.52□□□□□ -1.85
SSX4O60224 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.52□□□□□ -1.85
SSX4O60224 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX4O60224 AC034222.1-201ENST00000494052 532 ntBASIC3.52□□□□□ -1.85
SSX4O60224 AC021678.1-201ENST00000505195 936 ntBASIC3.52□□□□□ -1.85
SSX4O60224 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX4O60224 AC023141.12-201ENST00000512399 199 ntBASIC3.52□□□□□ -1.85
SSX4O60224 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.52□□□□□ -1.85
SSX4O60224 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.52□□□□□ -1.85
SSX4O60224 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.52□□□□□ -1.85
SSX4O60224 AC012182.1-201ENST00000570133 895 ntBASIC3.52□□□□□ -1.85
SSX4O60224 AC120057.2-201ENST00000571520 271 ntBASIC3.52□□□□□ -1.85
SSX4O60224 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.52□□□□□ -1.85
SSX4O60224 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.52□□□□□ -1.85
SSX4O60224 AC013444.2-201ENST00000603317 787 ntBASIC3.52□□□□□ -1.85
SSX4O60224 BRDTP1-201ENST00000605735 677 ntBASIC3.52□□□□□ -1.85
SSX4O60224 AC092354.2-201ENST00000607786 514 ntBASIC3.52□□□□□ -1.85
SSX4O60224 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.52□□□□□ -1.85
SSX4O60224 AC004908.3-201ENST00000610248 625 ntBASIC3.52□□□□□ -1.85
SSX4O60224 MIR6500-201ENST00000622700 86 ntBASIC3.52□□□□□ -1.85
SSX4O60224 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
SSX4O60224 AP001350.1-201ENST00000601906 1524 ntBASIC3.52□□□□□ -1.85
SSX4O60224 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SSX4O60224 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SSX4O60224 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SSX4O60224 PABPC1P9-201ENST00000426076 1612 ntBASIC3.52□□□□□ -1.85
SSX4O60224 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.51□□□□□ -1.85
SSX4O60224 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSX4O60224 AC006378.2-201ENST00000623178 2476 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSX4O60224 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSX4O60224 SNORA31-201ENST00000362607 130 ntBASIC3.51□□□□□ -1.85
SSX4O60224 Y_RNA.97-201ENST00000363094 102 ntBASIC3.51□□□□□ -1.85
SSX4O60224 RNU6-501P-201ENST00000364072 100 ntBASIC3.51□□□□□ -1.85
SSX4O60224 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX4O60224 RNU6-1074P-201ENST00000383995 104 ntBASIC3.51□□□□□ -1.85
SSX4O60224 RNU6-1181P-201ENST00000384191 106 ntBASIC3.51□□□□□ -1.85
SSX4O60224 MIR607-201ENST00000385241 96 ntBASIC3.51□□□□□ -1.85
SSX4O60224 RNU6-328P-201ENST00000390887 106 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AL021407.1-201ENST00000404531 386 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AC109780.2-201ENST00000413467 845 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AC009237.5-201ENST00000414271 501 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AL137014.1-201ENST00000420490 1226 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AC079780.1-201ENST00000428259 207 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX4O60224 AL365184.2-201ENST00000431139 435 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX4O60224 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX4O60224 ISCA1P2-201ENST00000438679 421 ntBASIC3.51□□□□□ -1.85
SSX4O60224 MTND1P30-201ENST00000441241 901 ntBASIC3.51□□□□□ -1.85
SSX4O60224 Z83846.1-201ENST00000446798 265 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX4O60224 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX4O60224 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX4O60224 AC104308.1-201ENST00000454621 333 ntBASIC3.51□□□□□ -1.85
SSX4O60224 RPL38P1-201ENST00000460914 211 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AC021382.1-201ENST00000483523 359 ntBASIC3.51□□□□□ -1.85
SSX4O60224 RPL23AP55-201ENST00000498163 452 ntBASIC3.51□□□□□ -1.85
SSX4O60224 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX4O60224 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.51□□□□□ -1.85
SSX4O60224 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX4O60224 RNU6-1073P-201ENST00000517182 106 ntBASIC3.51□□□□□ -1.85
SSX4O60224 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.51□□□□□ -1.85
SSX4O60224 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX4O60224 AP003497.1-201ENST00000528472 562 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AP004242.1-201ENST00000533701 349 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX4O60224 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
SSX4O60224 RN7SL703P-201ENST00000578485 302 ntBASIC3.51□□□□□ -1.85
SSX4O60224 OR4K8P-201ENST00000578842 1048 ntBASIC3.51□□□□□ -1.85
SSX4O60224 MIR5685-201ENST00000579080 79 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.51□□□□□ -1.85
SSX4O60224 AC112187.2-201ENST00000604345 283 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AC002550.2-201ENST00000621246 394 ntBASIC3.51□□□□□ -1.85
SSX4O60224 AL353748.2-201ENST00000622148 471 ntBASIC3.51□□□□□ -1.85
SSX4O60224 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX4O60224 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSX4O60224 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SSX4O60224 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.51□□□□□ -1.85
SSX4O60224 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SSX4O60224 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSX4O60224 USP8P1-201ENST00000494673 3183 ntBASIC3.5□□□□□ -1.85
SSX4O60224 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SSX4O60224 ZNF833P-201ENST00000424938 1494 ntBASIC3.5□□□□□ -1.85
SSX4O60224 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX4O60224 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX4O60224 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SSX4O60224 RNU6-600P-201ENST00000362524 99 ntBASIC3.5□□□□□ -1.85
SSX4O60224 MIR135A2-201ENST00000384854 100 ntBASIC3.5□□□□□ -1.85
SSX4O60224 MIR184-201ENST00000384962 84 ntBASIC3.5□□□□□ -1.85
SSX4O60224 MIR200C-201ENST00000384980 68 ntBASIC3.5□□□□□ -1.85
SSX4O60224 U8.14-201ENST00000390843 143 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AL590704.1-201ENST00000402856 794 ntBASIC3.5□□□□□ -1.85
SSX4O60224 HSPE1P12-201ENST00000412576 301 ntBASIC3.5□□□□□ -1.85
SSX4O60224 Z97055.1-201ENST00000419730 712 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms