Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 OR5J1P-201ENST00000313544 939 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SRGAP3O43295 Y_RNA.67-201ENST00000362870 100 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 Y_RNA.157-201ENST00000363638 102 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SRGAP3O43295 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SRGAP3O43295 RNU1-39P-201ENST00000383897 165 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 RNU6-444P-201ENST00000383988 108 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 RNU6-952P-201ENST00000391164 108 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 HMGB1P17-201ENST00000403495 628 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 RPL7P25-201ENST00000404151 721 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 MIR1179-201ENST00000408703 91 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 RPS23P10-201ENST00000416185 486 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 MRPL50P2-201ENST00000416821 482 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 MTATP6P18-201ENST00000417994 673 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.23□□□□□ -1.57
SRGAP3O43295 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SRGAP3O43295 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.23□□□□□ -1.57
SRGAP3O43295 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.23□□□□□ -1.57
SRGAP3O43295 AC007537.2-201ENST00000472093 511 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AC010301.1-201ENST00000473936 355 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AC093278.1-201ENST00000494700 600 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 RPS27AP13-201ENST00000498403 237 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AC139783.2-201ENST00000504847 1145 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.23□□□□□ -1.57
SRGAP3O43295 AC105029.1-201ENST00000520250 669 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.23□□□□□ -1.57
SRGAP3O43295 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.23□□□□□ -1.57
SRGAP3O43295 SULT1C2P1-202ENST00000562418 459 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AC122134.1-201ENST00000565664 1104 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.23□□□□□ -1.57
SRGAP3O43295 AC012182.1-201ENST00000570133 895 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AL355375.2-201ENST00000574825 175 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.23□□□□□ -1.57
SRGAP3O43295 RN7SL600P-201ENST00000581811 299 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 MIR4697-201ENST00000582977 78 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 BBIP1P1-201ENST00000602999 279 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.23□□□□□ -1.57
SRGAP3O43295 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.23□□□□□ -1.57
SRGAP3O43295 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.23□□□□□ -1.57
SRGAP3O43295 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 AC105074.1-201ENST00000623380 3095 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SRGAP3O43295 AC009951.1-201ENST00000623674 2614 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 SAMMSON-213ENST00000641336 1521 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SRGAP3O43295 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SRGAP3O43295 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.22□□□□□ -1.57
SRGAP3O43295 NOL8P1-201ENST00000508336 3529 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 ERCC6-202ENST00000374127 1782 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.22□□□□□ -1.57
SRGAP3O43295 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.22□□□□□ -1.57
SRGAP3O43295 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SRGAP3O43295 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SRGAP3O43295 Y_RNA.46-201ENST00000362695 102 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 RNU6-225P-201ENST00000384613 103 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 RPL23AP32-201ENST00000395315 459 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 DHFRP6-201ENST00000401776 268 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.22□□□□□ -1.57
SRGAP3O43295 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.22□□□□□ -1.57
SRGAP3O43295 COX6CP15-201ENST00000426313 211 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.22□□□□□ -1.57
SRGAP3O43295 USP9YP15-201ENST00000442391 422 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 MRPL50P4-201ENST00000446432 475 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.22□□□□□ -1.57
SRGAP3O43295 AL121877.1-201ENST00000453704 622 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 AC083798.1-201ENST00000472671 131 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.22□□□□□ -1.57
SRGAP3O43295 AC026427.2-201ENST00000506228 536 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.22□□□□□ -1.57
SRGAP3O43295 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.22□□□□□ -1.57
SRGAP3O43295 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.22□□□□□ -1.57
SRGAP3O43295 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.22□□□□□ -1.57
SRGAP3O43295 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.22□□□□□ -1.57
SRGAP3O43295 AC116158.1-201ENST00000560231 2129 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 AC099489.2-201ENST00000574976 260 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 SNORD39.3-201ENST00000584451 71 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 VN1R84P-201ENST00000593697 235 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 AL360085.1-201ENST00000604713 532 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 RMST_7.1-201ENST00000621935 268 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.22□□□□□ -1.57
SRGAP3O43295 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SRGAP3O43295 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SRGAP3O43295 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.22□□□□□ -1.57
SRGAP3O43295 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SRGAP3O43295 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SRGAP3O43295 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SRGAP3O43295 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SRGAP3O43295 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SRGAP3O43295 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.21□□□□□ -1.57
SRGAP3O43295 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SRGAP3O43295 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
SRGAP3O43295 Y_RNA.166-201ENST00000363730 102 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 BNIP3P2-201ENST00000441221 577 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.21□□□□□ -1.58
SRGAP3O43295 CBWD4P-201ENST00000445695 655 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 RPL7P12-201ENST00000446719 750 ntBASIC5.21□□□□□ -1.58
SRGAP3O43295 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms