Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.14□□□□□ -1.91
PHF1O43189 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.14□□□□□ -1.91
PHF1O43189 RNA5SP208-201ENST00000516156 78 ntBASIC3.14□□□□□ -1.91
PHF1O43189 RNA5SP164-201ENST00000516533 110 ntBASIC3.14□□□□□ -1.91
PHF1O43189 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.14□□□□□ -1.91
PHF1O43189 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.14□□□□□ -1.91
PHF1O43189 AC007991.1-201ENST00000522680 631 ntBASIC3.14□□□□□ -1.91
PHF1O43189 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.14□□□□□ -1.91
PHF1O43189 DEFB131D-201ENST00000526803 184 ntBASIC3.14□□□□□ -1.91
PHF1O43189 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.14□□□□□ -1.91
PHF1O43189 AC090502.2-201ENST00000549267 280 ntBASIC3.14□□□□□ -1.91
PHF1O43189 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.14□□□□□ -1.91
PHF1O43189 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.14□□□□□ -1.91
PHF1O43189 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.14□□□□□ -1.91
PHF1O43189 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.14□□□□□ -1.91
PHF1O43189 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.14□□□□□ -1.91
PHF1O43189 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.14□□□□□ -1.91
PHF1O43189 AC006960.3-201ENST00000561845 705 ntBASIC3.14□□□□□ -1.91
PHF1O43189 MIR5047-201ENST00000579212 100 ntBASIC3.14□□□□□ -1.91
PHF1O43189 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.14□□□□□ -1.91
PHF1O43189 AL358072.1-201ENST00000604156 575 ntBASIC3.14□□□□□ -1.91
PHF1O43189 AC006270.3-201ENST00000605967 1036 ntBASIC3.14□□□□□ -1.91
PHF1O43189 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.14□□□□□ -1.91
PHF1O43189 AC024560.3-201ENST00000608482 349 ntBASIC3.14□□□□□ -1.91
PHF1O43189 MIR8058-201ENST00000615737 89 ntBASIC3.14□□□□□ -1.91
PHF1O43189 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PHF1O43189 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.14□□□□□ -1.91
PHF1O43189 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PHF1O43189 AC091965.5-201ENST00000624785 342 ntBASIC3.14□□□□□ -1.91
PHF1O43189 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.14□□□□□ -1.91
PHF1O43189 U6.98-201ENST00000637157 84 ntBASIC3.14□□□□□ -1.91
PHF1O43189 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.14□□□□□ -1.91
PHF1O43189 MTND5P24-201ENST00000438892 1767 ntBASIC3.14□□□□□ -1.91
PHF1O43189 AC093908.1-201ENST00000623125 8092 ntBASIC3.14□□□□□ -1.91
PHF1O43189 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PHF1O43189 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PHF1O43189 ZNF37BP-203ENST00000452306 1352 ntBASIC3.13□□□□□ -1.91
PHF1O43189 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.13□□□□□ -1.91
PHF1O43189 DDX43P2-201ENST00000604753 1354 ntBASIC3.13□□□□□ -1.91
PHF1O43189 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PHF1O43189 AC090337.1-201ENST00000579651 2074 ntBASIC3.13□□□□□ -1.91
PHF1O43189 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PHF1O43189 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PHF1O43189 AC021755.1-201ENST00000559747 1447 ntBASIC3.13□□□□□ -1.91
PHF1O43189 OR4G11P-202ENST00000642116 1414 ntBASIC3.13□□□□□ -1.91
PHF1O43189 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PHF1O43189 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.13□□□□□ -1.91
PHF1O43189 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PHF1O43189 CYCSP45-201ENST00000402289 315 ntBASIC3.13□□□□□ -1.91
PHF1O43189 RNU2-28P-201ENST00000410457 189 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AL133384.1-201ENST00000412744 351 ntBASIC3.13□□□□□ -1.91
PHF1O43189 RPS15AP40-201ENST00000419621 391 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.13□□□□□ -1.91
PHF1O43189 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.13□□□□□ -1.91
PHF1O43189 AL035407.1-201ENST00000429211 571 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AC097713.2-201ENST00000430199 356 ntBASIC3.13□□□□□ -1.91
PHF1O43189 VN1R108P-201ENST00000431580 830 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.13□□□□□ -1.91
PHF1O43189 RPL23AP16-201ENST00000441715 421 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.13□□□□□ -1.91
PHF1O43189 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.13□□□□□ -1.91
PHF1O43189 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.13□□□□□ -1.91
PHF1O43189 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.13□□□□□ -1.91
PHF1O43189 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.13□□□□□ -1.91
PHF1O43189 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.13□□□□□ -1.91
PHF1O43189 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.13□□□□□ -1.91
PHF1O43189 RPL31P13-201ENST00000484151 370 ntBASIC3.13□□□□□ -1.91
PHF1O43189 RPL7P23-201ENST00000493874 747 ntBASIC3.13□□□□□ -1.91
PHF1O43189 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.13□□□□□ -1.91
PHF1O43189 RAC1P2-201ENST00000511164 579 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AC104057.1-201ENST00000515547 497 ntBASIC3.13□□□□□ -1.91
PHF1O43189 RNU6-583P-201ENST00000516012 92 ntBASIC3.13□□□□□ -1.91
PHF1O43189 RNU6-1231P-201ENST00000517185 103 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.13□□□□□ -1.91
PHF1O43189 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.13□□□□□ -1.91
PHF1O43189 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PHF1O43189 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.13□□□□□ -1.91
PHF1O43189 CYCSP2-201ENST00000558168 301 ntBASIC3.13□□□□□ -1.91
PHF1O43189 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.13□□□□□ -1.91
PHF1O43189 AL512347.1-201ENST00000566420 503 ntBASIC3.13□□□□□ -1.91
PHF1O43189 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.13□□□□□ -1.91
PHF1O43189 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.13□□□□□ -1.91
PHF1O43189 AC011260.1-201ENST00000578420 472 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.13□□□□□ -1.91
PHF1O43189 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.13□□□□□ -1.91
PHF1O43189 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.13□□□□□ -1.91
PHF1O43189 KLKP1-201ENST00000595979 403 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AC245008.1-201ENST00000608123 476 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AL607023.1-201ENST00000620045 248 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AC243312.2-201ENST00000623340 601 ntBASIC3.13□□□□□ -1.91
PHF1O43189 PCMTD1P7-201ENST00000634506 357 ntBASIC3.13□□□□□ -1.91
PHF1O43189 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
PHF1O43189 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.13□□□□□ -1.91
PHF1O43189 USP8P1-201ENST00000494673 3183 ntBASIC3.13□□□□□ -1.91
PHF1O43189 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.13□□□□□ -1.91
PHF1O43189 AC011477.1-204ENST00000623416 1325 ntBASIC3.13□□□□□ -1.91
PHF1O43189 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PHF1O43189 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PHF1O43189 MTCO1P24-201ENST00000515438 1558 ntBASIC3.12□□□□□ -1.91
PHF1O43189 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms