Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC100793.4-201ENST00000613683 429 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC116165.2-201ENST00000616705 206 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 MIR8059-201ENST00000620427 81 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 AC002550.2-201ENST00000621246 394 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXN3O00409 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN3O00409 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN3O00409 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
FOXN3O00409 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXN3O00409 AC011460.1-201ENST00000636268 1834 ntBASIC4.37□□□□□ -1.71
FOXN3O00409 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN3O00409 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXN3O00409 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
FOXN3O00409 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
FOXN3O00409 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXN3O00409 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FOXN3O00409 AC068254.2-201ENST00000623938 3577 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
FOXN3O00409 AC126755.2-208ENST00000327792 462 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AC138969.1-213ENST00000331436 462 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXN3O00409 SNORD35B-201ENST00000363660 87 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 RNU6-1078P-201ENST00000364522 103 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 RNU6-359P-201ENST00000365466 108 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 RNU6-629P-201ENST00000384061 103 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 RNU6-348P-201ENST00000384386 107 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 RNU6-1215P-201ENST00000384441 102 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 SNORD3H-201ENST00000384486 214 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 RPS7P15-201ENST00000415804 584 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXN3O00409 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXN3O00409 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXN3O00409 RPS24P1-201ENST00000438550 371 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXN3O00409 ANP32BP2-201ENST00000454525 545 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.36□□□□□ -1.71
FOXN3O00409 RPL7P15-201ENST00000461190 712 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
FOXN3O00409 RPS27AP13-201ENST00000498403 237 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AC146944.2-203ENST00000502493 354 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AC139495.1-202ENST00000513164 354 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AC022616.6-201ENST00000520479 119 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AP003730.1-201ENST00000524605 285 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXN3O00409 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXN3O00409 RPL21P5-201ENST00000554662 472 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 MTATP6P3-201ENST00000581686 676 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 MIR5684-201ENST00000585074 65 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AC087683.1-201ENST00000591187 441 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 SNRPGP15-201ENST00000600149 222 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AC068790.3-201ENST00000602988 553 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXN3O00409 AL365503.1-201ENST00000605247 905 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 ARF4P1-201ENST00000605447 541 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AC108747.1-201ENST00000609508 535 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AC108479.2-201ENST00000617314 601 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 AC233309.1-201ENST00000619522 751 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.36□□□□□ -1.71
FOXN3O00409 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXN3O00409 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
FOXN3O00409 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXN3O00409 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXN3O00409 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXN3O00409 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXN3O00409 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXN3O00409 Z82217.1-201ENST00000625157 8149 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXN3O00409 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXN3O00409 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXN3O00409 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXN3O00409 OR6C69P-201ENST00000394268 893 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 RPL7P25-201ENST00000404151 721 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 RN7SKP33-201ENST00000410942 340 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 RNA5SP104-201ENST00000410989 118 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 RPS3AP3-201ENST00000411933 242 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 FAR2P2-201ENST00000413041 594 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 HMGB3P23-201ENST00000414981 585 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 MTCO3P12-201ENST00000416718 547 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 SSXP9-201ENST00000417503 292 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXN3O00409 RPL23AP38-201ENST00000423801 469 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC079780.1-201ENST00000428259 207 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 NANOGP6-201ENST00000429190 847 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC016712.1-201ENST00000431088 378 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC244505.5-201ENST00000443639 207 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 RPL17P49-201ENST00000443728 411 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 RAC1P7-201ENST00000445367 377 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXN3O00409 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXN3O00409 NUTF2P3-201ENST00000448540 384 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC009220.1-201ENST00000451614 275 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXN3O00409 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXN3O00409 KLF3P2-201ENST00000465138 268 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC006463.2-201ENST00000473326 348 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 MTND1P3-201ENST00000484956 952 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 RN7SL604P-201ENST00000492589 296 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC139783.2-201ENST00000504847 1145 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 NPM1P41-201ENST00000512920 831 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 RNU6-1095P-201ENST00000516148 108 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms