Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RPL31P50-201ENST00000471002 296 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC28A1O00337 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC28A1O00337 AC021146.8-201ENST00000507455 733 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 CBX3P3-201ENST00000508108 532 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 AC104619.4-201ENST00000510773 249 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC28A1O00337 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC28A1O00337 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.23□□□□□ -1.89
SLC28A1O00337 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SLC28A1O00337 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC28A1O00337 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SLC28A1O00337 OR6C7P-201ENST00000547875 934 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 AC010198.2-201ENST00000550612 259 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.23□□□□□ -1.89
SLC28A1O00337 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC28A1O00337 COX6CP3-201ENST00000580869 223 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.23□□□□□ -1.89
SLC28A1O00337 AC080013.3-201ENST00000606839 578 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 AC027449.1-201ENST00000608890 407 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC28A1O00337 AL078595.3-201ENST00000623815 1166 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SLC28A1O00337 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC28A1O00337 AC138915.3-201ENST00000562908 1389 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 AC091152.2-201ENST00000591628 2569 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC28A1O00337 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC28A1O00337 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SLC28A1O00337 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SLC28A1O00337 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC28A1O00337 RPL7P26-201ENST00000333817 754 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 RNA5SP197-201ENST00000363357 119 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 RNA5SP515-201ENST00000364570 118 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC28A1O00337 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC28A1O00337 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SLC28A1O00337 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC28A1O00337 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC28A1O00337 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC28A1O00337 ATP5JP1-201ENST00000431631 322 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC28A1O00337 CST9LP2-201ENST00000437612 320 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC28A1O00337 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC28A1O00337 Z99127.3-201ENST00000448158 395 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC28A1O00337 RBMY2UP-201ENST00000453474 324 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 RPL7P15-201ENST00000461190 712 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 RPS27P29-201ENST00000463110 252 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 RPL7P18-201ENST00000478965 734 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AC012181.1-201ENST00000479895 423 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC28A1O00337 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC28A1O00337 APOOP4-201ENST00000513530 597 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC28A1O00337 AC017037.2-201ENST00000513850 890 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC28A1O00337 AP001804.3-201ENST00000525146 880 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC28A1O00337 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC28A1O00337 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC28A1O00337 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.22□□□□□ -1.89
SLC28A1O00337 AC091057.2-201ENST00000602594 792 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AL109653.1-201ENST00000603091 248 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AC106900.2-201ENST00000604994 317 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AC092354.2-201ENST00000607786 514 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AC099778.2-201ENST00000610904 211 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 uc_338.1-201ENST00000612113 180 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AL121772.2-201ENST00000614331 297 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AL590099.1-201ENST00000615276 138 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AC006213.4-201ENST00000616184 634 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AP001002.2-201ENST00000625137 386 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC28A1O00337 AC009093.8-201ENST00000641769 292 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 AP000776.1-201ENST00000530032 1663 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 ZNF285B-201ENST00000561698 1767 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 DDX43P2-201ENST00000604753 1354 ntBASIC3.22□□□□□ -1.89
SLC28A1O00337 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC28A1O00337 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SLC28A1O00337 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SLC28A1O00337 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC28A1O00337 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 Y_RNA.234-201ENST00000364409 97 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 RNU6-343P-201ENST00000364709 104 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 SNORA72.3-201ENST00000365074 132 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SLC28A1O00337 MIR591-201ENST00000385290 95 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 SNORD17-201ENST00000390930 237 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AL445189.1-201ENST00000405722 338 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 MIR1193-201ENST00000408109 78 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC28A1O00337 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC28A1O00337 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC28A1O00337 SSR1P2-201ENST00000415208 787 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 CCDC58P2-201ENST00000417131 366 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 MTCYBP38-201ENST00000417160 1123 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC28A1O00337 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC28A1O00337 AL445584.1-201ENST00000431451 330 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms