Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.55□□□□□ -2
UPK1AO00322 AL138827.1-201ENST00000402666 306 ntBASIC2.55□□□□□ -2
UPK1AO00322 AL121978.1-201ENST00000402778 359 ntBASIC2.55□□□□□ -2
UPK1AO00322 AL591034.1-201ENST00000407447 340 ntBASIC2.55□□□□□ -2
UPK1AO00322 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.55□□□□□ -2
UPK1AO00322 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.55□□□□□ -2
UPK1AO00322 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.55□□□□□ -2
UPK1AO00322 AL357078.2-201ENST00000416486 427 ntBASIC2.55□□□□□ -2
UPK1AO00322 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.55□□□□□ -2
UPK1AO00322 AL606495.1-201ENST00000422100 813 ntBASIC2.55□□□□□ -2
UPK1AO00322 AC112220.1-201ENST00000434628 355 ntBASIC2.55□□□□□ -2
UPK1AO00322 NDUFA5P7-201ENST00000452914 242 ntBASIC2.55□□□□□ -2
UPK1AO00322 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.55□□□□□ -2
UPK1AO00322 AC010301.1-201ENST00000473936 355 ntBASIC2.55□□□□□ -2
UPK1AO00322 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.55□□□□□ -2
UPK1AO00322 AC011352.3-201ENST00000505162 593 ntBASIC2.55□□□□□ -2
UPK1AO00322 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.55□□□□□ -2
UPK1AO00322 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.55□□□□□ -2
UPK1AO00322 AC098799.2-201ENST00000509466 868 ntBASIC2.55□□□□□ -2
UPK1AO00322 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.55□□□□□ -2
UPK1AO00322 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.55□□□□□ -2
UPK1AO00322 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.55□□□□□ -2
UPK1AO00322 OR7K1P-201ENST00000546439 926 ntBASIC2.55□□□□□ -2
UPK1AO00322 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.55□□□□□ -2
UPK1AO00322 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.55□□□□□ -2
UPK1AO00322 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.55□□□□□ -2
UPK1AO00322 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.55□□□□□ -2
UPK1AO00322 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.55□□□□□ -2
UPK1AO00322 AC002546.1-201ENST00000588041 2504 ntBASIC2.55□□□□□ -2
UPK1AO00322 AL020997.3-201ENST00000602843 359 ntBASIC2.55□□□□□ -2
UPK1AO00322 SGO1P1-201ENST00000603525 1447 ntBASIC2.55□□□□□ -2
UPK1AO00322 AC008277.2-201ENST00000605196 797 ntBASIC2.55□□□□□ -2
UPK1AO00322 VIS1.1-201ENST00000610517 203 ntBASIC2.55□□□□□ -2
UPK1AO00322 AC004696.1-201ENST00000614345 607 ntBASIC2.55□□□□□ -2
UPK1AO00322 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.55□□□□□ -2
UPK1AO00322 AC095031.1-201ENST00000623685 672 ntBASIC2.55□□□□□ -2
UPK1AO00322 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.55□□□□□ -2
UPK1AO00322 AC103988.1-201ENST00000566382 2177 ntBASIC2.54□□□□□ -2
UPK1AO00322 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.54□□□□□ -2
UPK1AO00322 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.54□□□□□ -2
UPK1AO00322 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
UPK1AO00322 AC111188.2-201ENST00000529697 1387 ntBASIC2.54□□□□□ -2
UPK1AO00322 RNU1-112P-201ENST00000364401 164 ntBASIC2.54□□□□□ -2
UPK1AO00322 MIR16-1-201ENST00000385271 89 ntBASIC2.54□□□□□ -2
UPK1AO00322 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
UPK1AO00322 AP002784.2-201ENST00000397300 549 ntBASIC2.54□□□□□ -2
UPK1AO00322 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.54□□□□□ -2
UPK1AO00322 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.54□□□□□ -2
UPK1AO00322 AC109780.2-201ENST00000413467 845 ntBASIC2.54□□□□□ -2
UPK1AO00322 SSXP9-201ENST00000417503 292 ntBASIC2.54□□□□□ -2
UPK1AO00322 YPEL5P1-201ENST00000419731 367 ntBASIC2.54□□□□□ -2
UPK1AO00322 AC009237.2-201ENST00000421358 284 ntBASIC2.54□□□□□ -2
UPK1AO00322 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.54□□□□□ -2
UPK1AO00322 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.54□□□□□ -2
UPK1AO00322 AC087499.2-201ENST00000432861 149 ntBASIC2.54□□□□□ -2
UPK1AO00322 AL512661.1-201ENST00000434586 1253 ntBASIC2.54□□□□□ -2
UPK1AO00322 RABEPKP1-201ENST00000440529 1026 ntBASIC2.54□□□□□ -2
UPK1AO00322 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.54□□□□□ -2
UPK1AO00322 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.54□□□□□ -2
UPK1AO00322 TRBV26-201ENST00000456572 344 ntBASIC2.54□□□□□ -2
UPK1AO00322 AC133134.1-201ENST00000466800 359 ntBASIC2.54□□□□□ -2
UPK1AO00322 KC877373.1-201ENST00000479066 408 ntBASIC2.54□□□□□ -2
UPK1AO00322 AC025768.1-201ENST00000510057 267 ntBASIC2.54□□□□□ -2
UPK1AO00322 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
UPK1AO00322 MTCYBP37-201ENST00000510642 1133 ntBASIC2.54□□□□□ -2
UPK1AO00322 AC026412.2-201ENST00000512270 1075 ntBASIC2.54□□□□□ -2
UPK1AO00322 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.54□□□□□ -2
UPK1AO00322 AC123904.3-201ENST00000547218 814 ntBASIC2.54□□□□□ -2
UPK1AO00322 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
UPK1AO00322 AC007954.1-201ENST00000554198 494 ntBASIC2.54□□□□□ -2
UPK1AO00322 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
UPK1AO00322 AC087481.2-201ENST00000565492 330 ntBASIC2.54□□□□□ -2
UPK1AO00322 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.54□□□□□ -2
UPK1AO00322 BX664608.1-201ENST00000610519 487 ntBASIC2.54□□□□□ -2
UPK1AO00322 AC006329.2-201ENST00000611491 394 ntBASIC2.54□□□□□ -2
UPK1AO00322 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
UPK1AO00322 AL118556.2-201ENST00000614375 824 ntBASIC2.54□□□□□ -2
UPK1AO00322 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.54□□□□□ -2
UPK1AO00322 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.54□□□□□ -2
UPK1AO00322 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.54□□□□□ -2
UPK1AO00322 AL137790.1-201ENST00000634283 177 ntBASIC2.54□□□□□ -2
UPK1AO00322 AC091948.2-201ENST00000636510 279 ntBASIC2.54□□□□□ -2
UPK1AO00322 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.54□□□□□ -2
UPK1AO00322 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
UPK1AO00322 AC010733.2-201ENST00000589496 5702 ntBASIC2.54□□□□□ -2
UPK1AO00322 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.54□□□□□ -2
UPK1AO00322 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
UPK1AO00322 AC130650.2-201ENST00000618736 2403 ntBASIC2.53□□□□□ -2
UPK1AO00322 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
UPK1AO00322 AP002907.1-201ENST00000606361 1430 ntBASIC2.53□□□□□ -2
UPK1AO00322 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
UPK1AO00322 GNG5P1-201ENST00000255500 204 ntBASIC2.53□□□□□ -2
UPK1AO00322 SNORA11.1-201ENST00000408133 129 ntBASIC2.53□□□□□ -2
UPK1AO00322 RNA5SP21-201ENST00000410917 96 ntBASIC2.53□□□□□ -2
UPK1AO00322 RPL19P1-201ENST00000411635 428 ntBASIC2.53□□□□□ -2
UPK1AO00322 MRPL50P2-201ENST00000416821 482 ntBASIC2.53□□□□□ -2
UPK1AO00322 RPL7P44-201ENST00000424827 742 ntBASIC2.53□□□□□ -2
UPK1AO00322 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.53□□□□□ -2
UPK1AO00322 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
UPK1AO00322 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms