Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RPS20P32-201ENST00000456044 356 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC099563.1-201ENST00000456086 418 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 UBDP1-202ENST00000457888 382 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 RPS4XP10-201ENST00000465034 731 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC108145.1-201ENST00000503770 153 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 FAM92A1P2-202ENST00000504766 877 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 MIR3158-1-201ENST00000583596 81 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AL117336.2-201ENST00000602435 335 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC090578.1-201ENST00000604955 591 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC008966.2-201ENST00000606157 453 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC091834.1-201ENST00000614543 472 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 U73479.1-201ENST00000618062 168 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC006338.1-201ENST00000618453 749 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC099654.5-201ENST00000636479 350 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC092435.4-201ENST00000623012 4159 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 MTND5P17-201ENST00000418405 1603 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC068254.2-201ENST00000623938 3577 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 ELF2P3-201ENST00000445099 1506 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 Y_RNA.46-201ENST00000362695 102 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 RNU6-181P-201ENST00000363225 107 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 RNU6-1207P-201ENST00000384343 107 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 RPL17P50-201ENST00000396131 546 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 RPL7P25-201ENST00000404151 721 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 RNA5SP36-201ENST00000410197 133 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 RN7SKP235-201ENST00000410662 305 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AL157831.1-201ENST00000426134 473 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 USP12PX-201ENST00000432383 1057 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 MTND3P21-201ENST00000433774 331 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC073614.1-201ENST00000438690 650 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 MTCO3P18-201ENST00000440206 761 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 MTND6P13-201ENST00000443510 523 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AP1S2P1-201ENST00000457344 379 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 RN7SL542P-201ENST00000467147 294 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC108751.2-201ENST00000469993 231 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC099522.1-202ENST00000514718 367 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 RNU6-507P-201ENST00000516045 100 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 RNA5SP519-201ENST00000516480 119 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 SNORA67.7-201ENST00000516664 135 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 RNU1-45P-201ENST00000517191 141 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 MIR3682-201ENST00000581338 84 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AP000907.4-201ENST00000604143 237 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC009994.1-201ENST00000606889 253 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AL021997.2-201ENST00000615674 271 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 MIR6875-201ENST00000617506 72 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AL157786.1-207ENST00000627771 695 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 OR5H6-203ENST00000642105 978 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 AC018529.3-201ENST00000624212 2254 ntBASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CCDC187A0A096LP49 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 FRG1BP-201ENST00000278882 761 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 RNU6-97P-201ENST00000363387 104 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 RNU6-359P-201ENST00000365466 108 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 RPL21P65-201ENST00000406094 466 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AL359704.1-201ENST00000411586 781 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC138393.2-201ENST00000414742 246 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC127526.1-201ENST00000417526 366 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 EIF1P3-201ENST00000423841 334 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms