Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL389895.1-201ENST00000554127 252 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 SULT1C2P1-202ENST00000562418 459 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 MIR1254-2-201ENST00000579553 63 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 MIR4637-201ENST00000582405 84 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 BNIP3P9-201ENST00000603714 553 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 Y_RNA.38-201ENST00000362617 102 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 Y_RNA.295-201ENST00000364918 102 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AL583835.1-201ENST00000399570 407 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 USP9YP36-201ENST00000424581 829 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 ISCA1P6-201ENST00000427740 390 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AC009961.2-201ENST00000435771 251 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 RPL23AP81-201ENST00000455252 467 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 RNU7-136P-201ENST00000458819 69 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AC108751.2-201ENST00000469993 231 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 RN7SL691P-201ENST00000494487 301 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 RPS27AP13-201ENST00000498403 237 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 ARL4AP2-201ENST00000507378 601 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 RNU6-358P-201ENST00000516564 75 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AC090281.1-201ENST00000523019 276 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AP000790.1-201ENST00000528891 737 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AC109635.3-201ENST00000529536 185 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AC104383.1-201ENST00000530297 370 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AL133457.1-201ENST00000564251 987 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 SNORD39.3-201ENST00000584451 71 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AL161729.3-201ENST00000603533 673 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AL139286.1-201ENST00000604465 483 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AL359999.1-201ENST00000604513 294 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AL672167.1-203ENST00000641299 2975 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AC011978.2-201ENST00000569835 2054 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 AC017104.4-201ENST00000636283 1592 ntBASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.95□□□□□ -1.62
CTDP1Q9Y5B0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC106871.1-201ENST00000568324 3102 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC126323.6-202ENST00000568092 3511 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 CBX3P1-201ENST00000325243 554 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 RNA5SP388-201ENST00000362584 119 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 RNU6-769P-201ENST00000384407 104 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 HMGB1P17-201ENST00000403495 628 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 RN7SKP27-201ENST00000410684 333 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 USP9YP27-201ENST00000418455 438 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC008280.1-201ENST00000418851 412 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 MTCO1P20-201ENST00000425366 358 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 MTCYBP45-201ENST00000435243 565 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 RPL22P17-201ENST00000438729 315 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC092001.1-201ENST00000453012 261 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 RPS15AP17-201ENST00000470598 390 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC007537.2-201ENST00000472093 511 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 RPL23AP65-201ENST00000475608 468 ntBASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.94□□□□□ -1.62
CTDP1Q9Y5B0 VWA8P1-201ENST00000510889 176 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms