Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 AL078621.3-201ENST00000623707 2042 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 MTND5P28-201ENST00000438005 1594 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 MIR600-201ENST00000385007 98 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 MIR105-1-201ENST00000385222 81 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 RNU6-550P-201ENST00000391057 101 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 AL354766.1-201ENST00000423396 542 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 NOP56P2-201ENST00000447491 769 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 RPS24P6-201ENST00000452670 400 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 AC108078.2-201ENST00000510750 236 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 RN7SKP21-201ENST00000516503 220 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 RNU6-64P-201ENST00000517119 105 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 RNU1-54P-201ENST00000517181 120 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 AC020910.3-201ENST00000603701 874 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 AC025588.3-201ENST00000604182 274 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 AC103705.1-201ENST00000619013 241 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
ZC3H4Q9UPT8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 ZNF734P-201ENST00000419494 1534 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC005224.3-201ENST00000584683 2140 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AL034549.2-201ENST00000618285 3373 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 ZNF33CP-201ENST00000432492 2030 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC005592.1-201ENST00000566527 1640 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 RNA5SP453-201ENST00000362503 119 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 RNU6-450P-201ENST00000364654 107 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 RNA5SP91-201ENST00000390902 119 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 SNORA75.6-201ENST00000391318 127 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 RPL7P10-201ENST00000417407 739 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC008267.5-201ENST00000424928 265 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC016696.1-201ENST00000446949 318 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 RPS15AP27-201ENST00000449183 343 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC010733.1-201ENST00000451515 401 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 PCNPP5-201ENST00000452246 481 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 HMGB3P21-201ENST00000452483 547 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC116533.1-201ENST00000459748 321 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AP000797.2-201ENST00000475768 606 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 RPL23AP55-201ENST00000498163 452 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 RN7SKP122-201ENST00000515923 296 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC009643.1-201ENST00000532030 391 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC107918.3-201ENST00000533272 382 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 MIR4716-201ENST00000579628 84 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AL162431.4-201ENST00000604674 411 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC062037.2-201ENST00000610137 73 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 AC138627.2-201ENST00000624202 601 ntBASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ZC3H4Q9UPT8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
ZC3H4Q9UPT8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZC3H4Q9UPT8 AC092747.4-201ENST00000620519 1861 ntBASIC6.43□□□□□ -1.38
ZC3H4Q9UPT8 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZC3H4Q9UPT8 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
ZC3H4Q9UPT8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
ZC3H4Q9UPT8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZC3H4Q9UPT8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZC3H4Q9UPT8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZC3H4Q9UPT8 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms