Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 MTND5P33-201ENST00000571250 1450 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 FARSBP1-201ENST00000435808 1778 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 MIR383-201ENST00000362257 73 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 RNA5SP258-201ENST00000362750 119 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 RN7SKP226-201ENST00000364912 300 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 RNU5A-6P-201ENST00000384136 116 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 PTMAP2-201ENST00000397627 327 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 PPIAP31-201ENST00000405422 495 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 TMSB10P2-201ENST00000416049 131 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 RBMY1KP-201ENST00000423480 476 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC087312.1-201ENST00000471411 480 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC004924.1-201ENST00000480160 781 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AL358832.1-201ENST00000497800 389 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 MTND4LP26-201ENST00000518144 282 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 IGKV2D-36-201ENST00000518643 226 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 IFITM8P-201ENST00000522529 394 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 TPRKBP2-201ENST00000565969 475 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 MIR4286-201ENST00000580651 93 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC024220.1-201ENST00000603675 484 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC025588.3-201ENST00000604182 274 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AL359999.1-201ENST00000604513 294 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AL365503.1-201ENST00000605247 905 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AL031666.3-201ENST00000609320 1006 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC007684.1-201ENST00000609671 477 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC068944.2-201ENST00000610373 403 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 MIR6891-201ENST00000618788 93 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC136475.10-201ENST00000620253 385 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC103858.2-201ENST00000621471 543 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AC112484.5-201ENST00000624189 228 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 MIR4496-201ENST00000635896 61 ntBASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS4AQ9UN37 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 U8.3-201ENST00000363321 132 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 RNU6-525P-201ENST00000363685 104 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 Y_RNA.234-201ENST00000364409 97 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 RNU6-339P-201ENST00000384310 107 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 MIR513A2-201ENST00000385249 127 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 MIR3065-201ENST00000390137 79 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 RNA5SP44-201ENST00000410446 133 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AC078974.1-201ENST00000411597 223 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AMD1P2-201ENST00000412936 992 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AL353777.1-201ENST00000425552 326 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 RABEPKP1-201ENST00000440529 1026 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AL353691.1-201ENST00000451332 387 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AL645939.1-201ENST00000453429 797 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 HMGB1P15-201ENST00000453854 435 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 TMED11P-201ENST00000479478 690 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AC106872.2-201ENST00000494303 480 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 RNA5SP143-201ENST00000516936 115 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 RNU6-714P-201ENST00000516963 103 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 RNU2-46P-201ENST00000517038 113 ntBASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS4AQ9UN37 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms