Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 HMGB1P25-201ENST00000468402 607 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 AC069499.1-201ENST00000489433 509 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 RPL23AP72-201ENST00000492447 435 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 AC111000.3-201ENST00000508057 576 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 MTND5P4-201ENST00000514978 288 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 MIR2114-201ENST00000516645 80 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 RPS3AP4-201ENST00000555161 764 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 MIR548S-201ENST00000581352 82 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 AC011816.2-201ENST00000607089 556 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 AC128687.2-201ENST00000609657 566 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP25Q9UHP3 AC108479.2-201ENST00000617314 601 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 AL596245.1-201ENST00000618994 362 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 AC093591.3-201ENST00000634516 308 ntBASIC4.75□□□□□ -1.65
USP25Q9UHP3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP25Q9UHP3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
USP25Q9UHP3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP25Q9UHP3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP25Q9UHP3 RNU1-14P-201ENST00000362759 152 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 Y_RNA.598-201ENST00000410480 95 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 RN7SKP235-201ENST00000410662 305 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 CYP4F29P-201ENST00000420685 446 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 AL356583.2-201ENST00000426536 280 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 MTCO1P27-201ENST00000448269 226 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 RPL7P52-201ENST00000449200 742 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 RPS29P33-201ENST00000456717 146 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 RPS29P19-201ENST00000479709 171 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 RPL35P6-201ENST00000490024 372 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 RPL31P61-201ENST00000496160 376 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 KCTD9P2-201ENST00000512203 1013 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 IGKV2-38-201ENST00000517443 247 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC118273.2-201ENST00000532092 465 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 MIR5697-201ENST00000578045 78 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC234771.5-201ENST00000600161 514 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 PRELID3BP8-201ENST00000604148 295 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 AL451044.1-201ENST00000604867 238 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 uc_338.32-201ENST00000615087 172 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AL139089.1-201ENST00000620372 975 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 AL445363.3-201ENST00000623080 671 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 CR381653.2-201ENST00000624041 768 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.74□□□□□ -1.65
USP25Q9UHP3 AC244517.1-201ENST00000606030 2086 ntBASIC4.74□□□□□ -1.65
USP25Q9UHP3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP25Q9UHP3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP25Q9UHP3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
USP25Q9UHP3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
USP25Q9UHP3 ELF2P3-201ENST00000445099 1506 ntBASIC4.73□□□□□ -1.65
USP25Q9UHP3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP25Q9UHP3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
USP25Q9UHP3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.73□□□□□ -1.65
USP25Q9UHP3 RNU6-289P-201ENST00000364093 107 ntBASIC4.73□□□□□ -1.65
USP25Q9UHP3 AL583835.1-201ENST00000399570 407 ntBASIC4.73□□□□□ -1.65
USP25Q9UHP3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP25Q9UHP3 EI24P1-201ENST00000416584 867 ntBASIC4.73□□□□□ -1.65
USP25Q9UHP3 AC127526.1-201ENST00000417526 366 ntBASIC4.73□□□□□ -1.65
USP25Q9UHP3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.73□□□□□ -1.65
USP25Q9UHP3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.73□□□□□ -1.65
USP25Q9UHP3 DPPA2P1-201ENST00000428060 556 ntBASIC4.73□□□□□ -1.65
USP25Q9UHP3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.73□□□□□ -1.65
USP25Q9UHP3 AC000111.3-201ENST00000433478 193 ntBASIC4.73□□□□□ -1.65
USP25Q9UHP3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.73□□□□□ -1.65
USP25Q9UHP3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.73□□□□□ -1.65
USP25Q9UHP3 WASF1P1-201ENST00000447560 1131 ntBASIC4.73□□□□□ -1.65
USP25Q9UHP3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.73□□□□□ -1.65
USP25Q9UHP3 BTF3P5-201ENST00000457252 467 ntBASIC4.73□□□□□ -1.65
USP25Q9UHP3 snoU109.1-201ENST00000459339 135 ntBASIC4.73□□□□□ -1.65
USP25Q9UHP3 ST13P14-201ENST00000474095 734 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms