Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPC1L1Q9UHC9 AC005183.1-201ENST00000603687 1979 ntBASIC3.74□□□□□ -1.81
NPC1L1Q9UHC9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 RNU4-82P-201ENST00000362443 140 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 SNORA51.4-201ENST00000364993 124 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 RN7SKP123-201ENST00000410732 291 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 RPS3AP9-201ENST00000417027 792 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 NUP35P1-201ENST00000422734 947 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AC096632.1-201ENST00000427395 310 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 Z99714.1-201ENST00000450463 807 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 SLC31A1P1-201ENST00000451221 567 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 RNA5SP282-201ENST00000516355 108 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AP003102.1-201ENST00000525638 661 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 OR5D17P-201ENST00000531492 978 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AC074051.3-201ENST00000570238 358 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 RPAP2P1-201ENST00000603626 1168 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AL009028.1-201ENST00000604895 802 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AC099785.1-201ENST00000605697 437 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AC106858.1-201ENST00000637497 429 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AL157700.1-201ENST00000561973 1432 ntBASIC3.73□□□□□ -1.81
NPC1L1Q9UHC9 AL359693.1-201ENST00000614959 2407 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 AL021368.2-201ENST00000606125 5352 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 RNU6-619P-201ENST00000365146 108 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 AL121978.1-201ENST00000402778 359 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 RNA5SP184-201ENST00000411071 108 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 AC092638.1-201ENST00000411966 1275 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 AL590399.6-201ENST00000446396 307 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 NCOR1P1-202ENST00000486162 291 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 RNA5SP385-201ENST00000515947 110 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 AC023825.1-201ENST00000566704 1030 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 AC138761.3-201ENST00000579993 334 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 MIR4506-201ENST00000584693 77 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 ZNF861P-201ENST00000588126 639 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 AC005014.3-201ENST00000605985 190 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 AC006111.3-201ENST00000622137 383 ntBASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPC1L1Q9UHC9 MAPK10-362ENST00000641864 4484 ntBASIC3.71□□□□□ -1.81
NPC1L1Q9UHC9 AP001486.2-201ENST00000561652 5113 ntBASIC3.71□□□□□ -1.81
NPC1L1Q9UHC9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 SNORA31-201ENST00000362607 130 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 OR1L1-202ENST00000373686 1083 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AL445529.1-201ENST00000398713 389 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 SSXP10-201ENST00000402595 565 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 SFR1P1-201ENST00000403720 688 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AL592148.1-201ENST00000413568 445 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 RPL36P19-201ENST00000430744 301 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 NPM1P49-201ENST00000448027 714 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AC108860.1-201ENST00000484521 383 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AP001086.1-201ENST00000494882 321 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AC034159.1-201ENST00000513885 583 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AC104057.1-201ENST00000515547 497 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 COX6CP8-201ENST00000522620 226 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AC104417.1-201ENST00000523974 751 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 HMGB1P6-201ENST00000569046 646 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AC012119.1-201ENST00000603184 222 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 RPL23AP92-201ENST00000603609 255 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AC005046.1-201ENST00000608515 625 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AL109620.1-201ENST00000618738 1197 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AC010872.1-201ENST00000624225 675 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 AC126544.2-201ENST00000625174 749 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms