Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AL009028.1-201ENST00000604895 802 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AL121917.1-203ENST00000605534 577 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AC007619.2-201ENST00000605743 379 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 AC245517.5-201ENST00000611529 162 ntBASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COMMD3Q9UBI1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AC090740.1-201ENST00000623193 2262 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AL596028.1-201ENST00000326971 197 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 RNA5SP138-201ENST00000365098 114 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 RNA5SP338-201ENST00000410495 85 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 IPO7P1-201ENST00000442031 636 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AL590664.1-201ENST00000448065 339 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 RPL23AP7-203ENST00000449021 469 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 SETP11-201ENST00000473027 690 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AC015908.1-201ENST00000478739 476 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 RPL30P14-201ENST00000482744 348 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 RAC1P5-201ENST00000512182 576 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 MIR4429-201ENST00000580105 73 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AC239803.2-201ENST00000610161 430 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AL590410.1-201ENST00000617925 333 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AC092650.2-201ENST00000619984 902 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AC092608.2-201ENST00000624427 218 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 MIR203B-201ENST00000636080 86 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 AC011460.1-201ENST00000636268 1834 ntBASIC1.96□□□□□ -2.1
COMMD3Q9UBI1 ZNF519P1-201ENST00000449011 1626 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC104446.1-201ENST00000613728 1321 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC010680.1-201ENST00000590024 3590 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 RNU4-31P-201ENST00000384211 141 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC096533.1-201ENST00000411645 353 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 RPS3AP25-201ENST00000411660 793 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC096632.1-201ENST00000427395 310 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 SRIP2-201ENST00000428470 166 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 ARL5AP4-201ENST00000430731 512 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 MTCYBP34-201ENST00000439552 670 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 SNORD109B-201ENST00000458961 67 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 SNORD109A-201ENST00000459128 67 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC090515.1-201ENST00000465295 476 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC079804.2-201ENST00000490376 200 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC006445.2-201ENST00000510061 472 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 COX6B1P6-201ENST00000522347 255 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC021269.2-201ENST00000532318 330 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AL049870.4-201ENST00000555741 486 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 OR4G1P-201ENST00000588632 938 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 SRGNP1-201ENST00000603392 451 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC079880.2-201ENST00000603790 1213 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AP004372.1-201ENST00000604842 844 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 NF1P10-201ENST00000613227 742 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC095031.1-201ENST00000623685 672 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 AC016717.2-201ENST00000609089 5141 ntBASIC1.95□□□□□ -2.1
COMMD3Q9UBI1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 RNU6-1243P-201ENST00000364028 107 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 SNORA44-201ENST00000384584 132 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 MIR518C-201ENST00000384822 101 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 RN7SKP140-201ENST00000411196 284 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AJ239321.1-201ENST00000424255 564 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms