Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 SRP72P2-201ENST00000344851 1979 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC244517.1-201ENST00000606030 2086 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AL079305.1-201ENST00000623159 3008 ntBASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLCF1Q9UBD9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 MIR122-201ENST00000385044 85 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AL138885.1-201ENST00000405921 675 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 RNU2-42P-201ENST00000410697 113 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 GTF2IP23-201ENST00000423746 351 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC012497.1-201ENST00000429392 575 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 HSFY7P-201ENST00000432672 318 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 SETP5-201ENST00000437270 562 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 HSFY8P-201ENST00000437934 318 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 MTCYBP11-201ENST00000447254 1109 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 HSFY5P-201ENST00000453726 309 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 RPL21P104-201ENST00000464143 478 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC010285.1-201ENST00000470580 392 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC108734.3-201ENST00000481241 1165 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC021146.5-201ENST00000503544 545 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 FABP5P12-201ENST00000515543 389 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AP001207.2-201ENST00000519490 539 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC021451.1-201ENST00000523498 1129 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AP001636.2-201ENST00000525517 696 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 PSMA2P1-201ENST00000526365 646 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC011602.1-201ENST00000546484 331 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC125611.1-201ENST00000549563 229 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC011471.1-201ENST00000585766 187 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 RPL23AP92-201ENST00000603609 255 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AL121652.1-201ENST00000608851 448 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AL391834.2-201ENST00000609982 546 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AL138478.1-201ENST00000612252 832 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC099506.2-201ENST00000623074 221 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC103798.2-201ENST00000624292 632 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 AC118273.1-201ENST00000525324 3006 ntBASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CLCF1Q9UBD9 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC021755.1-201ENST00000559747 1447 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 GNG5P1-201ENST00000255500 204 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 SNORA54-201ENST00000384281 123 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 SNORA40.2-201ENST00000390847 128 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 U3.29-201ENST00000391296 212 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 RNA5SP31-201ENST00000411144 127 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 RPL7P44-201ENST00000424827 742 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 HMGB1P12-201ENST00000438594 598 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 snoU109.4-201ENST00000458953 143 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 RPS4XP13-201ENST00000483219 789 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 MTCO3P35-201ENST00000485582 781 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC092185.1-201ENST00000491371 97 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC010265.1-201ENST00000513509 211 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 GMPSP1-201ENST00000514075 579 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC008885.1-201ENST00000514930 301 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 RNU6-1225P-201ENST00000516336 65 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 OR4P1P-201ENST00000530808 1136 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 EEF1B2P4-201ENST00000551398 348 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 BNIP3P24-201ENST00000593398 557 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 VN1R83P-201ENST00000595685 445 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 VN1R92P-201ENST00000598511 928 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 XIAPP1-201ENST00000603162 600 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 PRELID3BP8-201ENST00000604148 295 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC021749.1-201ENST00000604322 607 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AL365400.2-201ENST00000605604 902 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC090425.2-201ENST00000608818 501 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms