Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC068647.1-201ENST00000489539 2265 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 RNU6-343P-201ENST00000364709 104 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 SNORA73.2-201ENST00000364946 201 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 RNU6-328P-201ENST00000390887 106 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 RPS3AP26-201ENST00000398259 784 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AL356421.1-201ENST00000403255 413 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC007389.2-201ENST00000434630 306 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 HMGN2P20-201ENST00000437531 273 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AL672167.3-201ENST00000465951 960 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 FCF1P3-201ENST00000496394 590 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC093809.1-201ENST00000509155 340 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC009097.3-201ENST00000563557 1018 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 MIR3921-201ENST00000577308 85 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC013244.3-201ENST00000605614 388 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC009039.2-201ENST00000624524 529 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC007256.1-201ENST00000392253 2765 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC087359.1-201ENST00000508335 1740 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC009812.4-201ENST00000569134 1805 ntBASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
BLOC1S4Q9NUP1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
BLOC1S4Q9NUP1 AC005832.2-201ENST00000538921 1430 ntBASIC3.96□□□□□ -1.77
BLOC1S4Q9NUP1 AC091152.2-201ENST00000591628 2569 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 RPL7P26-201ENST00000333817 754 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 RNU6-1207P-201ENST00000384343 107 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 YPEL5P1-201ENST00000419731 367 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC024082.2-201ENST00000434771 238 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 SNRPEP4-201ENST00000435815 279 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC122718.1-201ENST00000439448 744 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC108734.1-201ENST00000439549 399 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 RABEPKP1-201ENST00000440529 1026 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 EEF1E1P1-201ENST00000446998 430 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 FAM133DP-201ENST00000464802 691 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC021382.1-201ENST00000483523 359 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC108860.1-201ENST00000484521 383 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AP001025.2-201ENST00000490908 477 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC104685.1-201ENST00000502445 371 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC104619.4-201ENST00000510773 249 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC026801.2-201ENST00000515352 425 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 RNU1-45P-201ENST00000517191 141 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC026333.2-201ENST00000542164 106 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 SETP2-201ENST00000553886 926 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC055876.1-202ENST00000567053 138 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC022149.2-201ENST00000621061 203 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC018816.2-201ENST00000621460 353 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC103706.2-201ENST00000638080 240 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AC010733.2-201ENST00000589496 5702 ntBASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.96□□□□□ -1.78
BLOC1S4Q9NUP1 CEP170P1-201ENST00000502249 4587 ntBASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BLOC1S4Q9NUP1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms