Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC053481.3-201ENST00000577881 843 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 MIR3944-201ENST00000581277 108 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 XIAPP1-201ENST00000603162 600 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 BNIP3P11-201ENST00000603878 563 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AC107952.2-201ENST00000606048 486 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AC080013.3-201ENST00000606839 578 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AC006023.2-201ENST00000609916 167 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 AC018755.4-201ENST00000619715 454 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 CR383658.2-201ENST00000547576 1525 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMC4Q9NTJ3 OR4G11P-202ENST00000642116 1414 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 GABPAP-201ENST00000419271 1356 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AC017071.1-201ENST00000564407 2204 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 RNU6-600P-201ENST00000362524 99 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 SNORA71.3-201ENST00000362582 128 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 EI24P2-201ENST00000397776 1076 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AC019178.2-201ENST00000423595 505 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AC006946.1-201ENST00000429106 328 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AL159987.2-201ENST00000432754 307 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 TXNP1-201ENST00000441872 371 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AC006390.1-201ENST00000508068 283 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AC010587.2-201ENST00000511727 448 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 FABP5P12-201ENST00000515543 389 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 DEFB131D-201ENST00000526803 184 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 SETP7-201ENST00000552169 453 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 VN1R78P-201ENST00000597393 564 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AL365503.1-201ENST00000605247 905 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AC245297.2-201ENST00000610119 565 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AP002782.1-201ENST00000623107 614 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 AC058791.1-201ENST00000608412 3198 ntBASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMC4Q9NTJ3 DDX43P2-201ENST00000604753 1354 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 OR5BR1P-201ENST00000524992 1330 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 MTND5P24-201ENST00000438892 1767 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 MTCO1P12-201ENST00000414273 1543 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 RPL23AP57-201ENST00000332361 466 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 RNU1-70P-201ENST00000362618 164 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 RNU1-33P-201ENST00000364249 162 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 RPL23AP29-201ENST00000397284 453 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 DHFRP6-201ENST00000401776 268 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 MIR1284-201ENST00000408337 120 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 VDAC1P3-201ENST00000434069 851 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 MTND4LP10-201ENST00000435146 291 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 FGF7P5-201ENST00000441829 291 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 CYCSP35-201ENST00000451978 304 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 USP9YP10-201ENST00000454868 628 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 AP001992.1-205ENST00000462248 379 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 RPL21P104-201ENST00000464143 478 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 RPL21P13-201ENST00000488305 481 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 RPL23AP55-201ENST00000498163 452 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 AC021146.8-201ENST00000507455 733 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 RNU6-1073P-201ENST00000517182 106 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 AC022861.1-201ENST00000522981 663 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 OR5AK1P-201ENST00000524837 922 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 AC087465.1-201ENST00000560574 245 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 AC087481.2-201ENST00000565492 330 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 MIR4276-201ENST00000584832 70 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 AL592221.1-201ENST00000605266 382 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 AL592295.2-201ENST00000612578 206 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 U6.105-201ENST00000637379 88 ntBASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
SMC4Q9NTJ3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
SMC4Q9NTJ3 MTND4P34-201ENST00000572715 1371 ntBASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.27□□□□□ -1.73
SMC4Q9NTJ3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms