Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC055839.1-201ENST00000634467 498 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC097461.1-201ENST00000568928 2821 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 OR55B1P-203ENST00000641518 2602 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC092747.4-201ENST00000620519 1861 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSU72Q9NP77 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSU72Q9NP77 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 RNA5SP46-201ENST00000362370 120 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 Y_RNA.153-201ENST00000363615 91 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 SNORA63.7-201ENST00000365579 123 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 Y_RNA.404-201ENST00000383978 102 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 SNORA75B-201ENST00000384053 137 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 RNU4-6P-201ENST00000410804 122 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSU72Q9NP77 BX682237.1-201ENST00000415016 335 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC105402.2-201ENST00000438503 358 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 RPS11P7-201ENST00000442125 465 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 MRPL48P1-201ENST00000445390 636 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 AL162388.1-201ENST00000450912 352 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 HIGD1AP13-201ENST00000509878 289 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 RNU6-27P-201ENST00000516146 107 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 RNA5SP464-201ENST00000516251 108 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 RNA5SP271-201ENST00000516700 88 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 RNU6-1271P-201ENST00000517049 105 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 RNU6-685P-201ENST00000517088 95 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC005868.1-201ENST00000536421 331 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 DYNLL1P4-201ENST00000549314 266 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC079600.1-201ENST00000550326 297 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC124068.1-201ENST00000563131 678 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 AL354984.3-201ENST00000604803 325 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AP005432.2-201ENST00000608162 586 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC133104.2-201ENST00000615272 193 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 PLCE1P1-201ENST00000622094 305 ntBASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSU72Q9NP77 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSU72Q9NP77 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSU72Q9NP77 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSU72Q9NP77 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSU72Q9NP77 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSU72Q9NP77 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSU72Q9NP77 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.11□□□□□ -1.59
SSU72Q9NP77 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSU72Q9NP77 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSU72Q9NP77 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSU72Q9NP77 RNU6-1078P-201ENST00000364522 103 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 Y_RNA.364-201ENST00000365532 101 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSU72Q9NP77 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSU72Q9NP77 Y_RNA.473-201ENST00000384333 102 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 RNU6-328P-201ENST00000390887 106 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 RNA5SP219-201ENST00000390940 113 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 Y_RNA.645-201ENST00000391229 102 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 CKS1BP6-201ENST00000424932 240 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 RPL21P112-201ENST00000434403 463 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC092013.1-201ENST00000438795 332 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 Z98949.2-201ENST00000440996 144 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 Z95327.1-201ENST00000446082 482 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC005008.1-201ENST00000456151 612 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 RPL36AP13-201ENST00000457490 317 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 DYNLL1P5-201ENST00000467158 270 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms