Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RPL21P40-201ENST00000428586 483 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC109583.1-201ENST00000432156 268 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC004866.2-201ENST00000438285 481 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 RPS29P7-201ENST00000439662 171 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 OR6K5P-201ENST00000447050 945 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 VN1R10P-201ENST00000447106 875 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 RFC5P1-201ENST00000454419 874 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 Z82190.1-201ENST00000454534 490 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC092757.1-201ENST00000467293 467 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC092902.1-201ENST00000486999 259 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC068724.1-201ENST00000487100 792 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 RPS27P27-201ENST00000498779 255 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC008837.1-201ENST00000511513 412 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 SNORA31.1-201ENST00000515993 133 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 SNORA31.5-201ENST00000516190 133 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC087894.1-201ENST00000538359 518 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC092451.2-201ENST00000538746 658 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 OR8R1P-201ENST00000543943 764 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.53□□□□□ -2
SLIRPQ9GZT3 SETP7-201ENST00000552169 453 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AP005205.1-201ENST00000563503 508 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC106900.2-201ENST00000604994 317 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 ZYXP1-201ENST00000617638 118 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC138932.5-201ENST00000617759 563 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 RNA5SP196-201ENST00000625967 102 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 AC090897.3-201ENST00000636973 1157 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SLIRPQ9GZT3 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.53□□□□□ -2
SLIRPQ9GZT3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 RPL32P3-201ENST00000359025 275 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 MIR937-201ENST00000401271 86 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AL079342.2-201ENST00000403367 482 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AL354719.1-201ENST00000406535 843 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 HSFY4P-201ENST00000415994 1181 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC245052.5-201ENST00000416320 649 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC011242.1-201ENST00000433596 1158 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 PTGES3P1-201ENST00000439531 483 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 SBDSP1-204ENST00000453858 737 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 RNA5SP310-201ENST00000459084 116 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 CBX3P3-201ENST00000508108 532 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC010460.2-201ENST00000509054 677 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC104619.4-201ENST00000510773 249 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 RNU6-1261P-201ENST00000517194 104 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 FAM60DP-201ENST00000524174 632 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 OR5AK1P-201ENST00000524837 922 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC087897.1-201ENST00000550134 156 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC008507.2-201ENST00000588402 1176 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 TPMTP1-201ENST00000592307 737 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 BNIP3P24-201ENST00000593398 557 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC245036.5-201ENST00000596330 847 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AP002802.2-201ENST00000605877 235 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 BX664608.1-201ENST00000610519 487 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 CYCSP41-201ENST00000616920 296 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC006111.3-201ENST00000622137 383 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 MKKS-204ENST00000639674 192 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 AC009093.8-201ENST00000641769 292 ntBASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLIRPQ9GZT3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 CUL1P1-201ENST00000509510 2425 ntBASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 RNU6-173P-201ENST00000364215 104 ntBASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 SNORD65.1-201ENST00000390889 71 ntBASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 RNU1-101P-201ENST00000391171 127 ntBASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 RNA5SP38-201ENST00000410750 119 ntBASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 AL096701.2-201ENST00000416920 238 ntBASIC2.51□□□□□ -2.01
SLIRPQ9GZT3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms