Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 RNA5SP319-201ENST00000362768 119 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-596P-201ENST00000365395 98 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 SNORA70.9-201ENST00000384370 135 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 MIR517A-201ENST00000385001 87 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AL354766.1-201ENST00000423396 542 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 NOP56P2-201ENST00000447491 769 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 SNORA58-201ENST00000505219 137 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AL359273.1-201ENST00000510918 627 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AC144568.1-201ENST00000520139 137 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AL359219.2-201ENST00000555184 348 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 SULT1C2P2-201ENST00000562517 294 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AC009852.2-201ENST00000567898 485 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 NF1P5-201ENST00000588287 448 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AC234771.5-201ENST00000600161 514 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 MIR92B-201ENST00000607575 96 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 AC023813.4-201ENST00000607580 580 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 BX322639.1-202ENST00000423987 2213 ntBASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3Q9BZ76 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 RNA5SP205-201ENST00000364653 136 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-1303P-201ENST00000364841 107 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 SNORD82-201ENST00000365530 70 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 RNU5E-6P-201ENST00000365574 115 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 MIR625-201ENST00000385047 85 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 Y_RNA.597-201ENST00000410463 100 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-1135P-201ENST00000411083 103 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 SYF2P2-201ENST00000417620 583 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AC093162.1-201ENST00000419682 124 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AL445928.1-201ENST00000435545 222 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AC011753.3-201ENST00000443436 406 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 RNU7-187P-201ENST00000458985 68 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 YWHAEP4-201ENST00000505390 198 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 SEPT14P8-201ENST00000508026 178 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 snoU109.6-201ENST00000516831 118 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-685P-201ENST00000517088 95 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 RNU6-844P-201ENST00000517175 102 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AC126177.3-201ENST00000551839 688 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AC087783.2-201ENST00000605070 562 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 MIR6864-201ENST00000617935 70 ntBASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3Q9BZ76 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 AC024651.2-201ENST00000562480 2098 ntBASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 AC068769.1-201ENST00000474767 2426 ntBASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CNTNAP3Q9BZ76 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms