Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL159987.1-201ENST00000347911 293 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNY1P16-201ENST00000363063 111 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-216P-201ENST00000363282 104 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-697P-201ENST00000363348 107 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-343P-201ENST00000364709 104 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 Y_RNA.280-201ENST00000364765 112 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-915P-201ENST00000364943 103 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 Y_RNA.342-201ENST00000365352 113 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 Y_RNA.569-201ENST00000384749 103 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 SNORD37.2-201ENST00000391075 66 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 MIR1302-5-201ENST00000408164 150 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNA5SP178-201ENST00000410380 128 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 Y_RNA.595-201ENST00000410403 105 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-293P-201ENST00000411259 106 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RPL23AP26-201ENST00000412728 464 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RPL26P27-201ENST00000414397 437 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 COX6CP17-201ENST00000421389 185 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC007568.1-201ENST00000422912 471 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC245884.2-201ENST00000426257 404 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 VTI1BP4-201ENST00000427516 527 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC119618.1-201ENST00000434191 222 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 BX679664.1-201ENST00000434429 253 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RPS20P5-201ENST00000434808 360 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 MTATP8P2-201ENST00000435212 202 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL445928.1-201ENST00000435545 222 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RPS3AP38-201ENST00000435889 763 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 Z82210.1-201ENST00000440037 231 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 KRTAP8-2P-201ENST00000440620 186 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL663074.2-201ENST00000440621 479 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 IFNA11P-201ENST00000446352 526 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 MTCO1P27-201ENST00000448269 226 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 OR7E116P-201ENST00000448529 957 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 GAPDHP14-201ENST00000450472 937 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 SNRPFP3-201ENST00000457792 225 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 Y_RNA.649-201ENST00000459077 103 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU7-171P-201ENST00000459581 62 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC010683.1-201ENST00000473673 378 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RN7SL214P-201ENST00000487317 265 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC114728.1-201ENST00000488289 483 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RPL21P13-201ENST00000488305 481 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RN7SL184P-201ENST00000488308 297 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RPS4XP14-201ENST00000493072 781 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC009120.1-201ENST00000493458 473 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC091959.1-201ENST00000495857 238 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL136038.1-201ENST00000497246 351 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC109481.1-201ENST00000509173 282 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC092436.3-201ENST00000511788 257 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU2-13P-201ENST00000515909 113 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 SCARNA18.1-201ENST00000516330 83 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 MIR2117-201ENST00000516780 80 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 SNORA70.20-201ENST00000516848 126 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-612P-201ENST00000516909 102 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-201P-201ENST00000517100 61 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC025647.1-201ENST00000517879 253 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 DEFB131D-201ENST00000526803 184 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AP006289.1-201ENST00000538089 277 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC090115.3-201ENST00000553218 849 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 DPPA3P2-201ENST00000553589 478 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 TRAV32-201ENST00000553993 340 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC091078.2-201ENST00000557145 559 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 MED28P6-201ENST00000558776 231 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC090877.1-201ENST00000561418 344 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC133485.4-201ENST00000561835 220 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC138907.4-201ENST00000570107 226 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC119403.2-201ENST00000590960 598 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL451044.1-201ENST00000604867 238 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL354798.1-201ENST00000622505 329 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC130448.2-201ENST00000624082 374 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 U6.92-201ENST00000636464 89 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms