Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 MIR6075-201ENST00000620782 95 ntBASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 AP004289.2-201ENST00000444413 1457 ntBASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PAAF1Q9BRP4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 RNU6-989P-201ENST00000362756 107 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 SNORA5A-201ENST00000384111 134 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 SNORD51-201ENST00000384320 80 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 RNU6-348P-201ENST00000384386 107 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 RPS20P2-201ENST00000402520 389 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 RNU6-648P-201ENST00000410190 107 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 Y_RNA.608-201ENST00000410647 95 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC245052.5-201ENST00000416320 649 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 SPA17P1-201ENST00000416656 452 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 SYF2P2-201ENST00000417620 583 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AL591419.1-201ENST00000427423 339 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 UBE2V1P13-201ENST00000436983 439 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC091862.1-201ENST00000438016 1100 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 HMGB1P37-201ENST00000439613 609 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC098824.1-201ENST00000453565 980 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 UBDP1-202ENST00000457888 382 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 RPL21P11-201ENST00000461458 483 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 RNU6-1003P-201ENST00000517099 105 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AF186190.1-201ENST00000517470 480 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 CCNG2P1-201ENST00000549521 1000 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC034268.2-201ENST00000571784 482 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 MIR4528-201ENST00000577763 90 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC073648.5-201ENST00000603502 305 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC080078.2-201ENST00000603766 501 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC011816.2-201ENST00000607089 556 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 OR10AB1P-201ENST00000609613 938 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AL589743.7-201ENST00000612637 233 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AP001506.1-201ENST00000615444 211 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 AC104010.1-201ENST00000616889 150 ntBASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PAAF1Q9BRP4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 MFSD8-236ENST00000641509 4050 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 SOD2P1-201ENST00000396543 562 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 RPL7P60-201ENST00000397636 735 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 RNA5SP56-201ENST00000410277 118 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 RPS3AP3-201ENST00000411933 242 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 AC244505.5-201ENST00000443639 207 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 RPS17P13-201ENST00000448974 407 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 AL133162.1-201ENST00000463228 453 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 KLF3P2-201ENST00000465138 268 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 RPL31P61-201ENST00000496160 376 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 DUXAP2-201ENST00000519198 589 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 AC009977.1-201ENST00000586015 570 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 BNIP3P22-201ENST00000593399 556 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 AL136363.2-201ENST00000604173 851 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 IGHV3-29-201ENST00000604817 344 ntBASIC4.13□□□□□ -1.75
PAAF1Q9BRP4 NDUFA8P1-201ENST00000605525 367 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms