Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.34□□□□□ -1.88
IFT140Q96RY7 MLLT10P2-201ENST00000506434 249 ntBASIC3.34□□□□□ -1.88
IFT140Q96RY7 AC020895.1-201ENST00000595362 272 ntBASIC3.34□□□□□ -1.88
IFT140Q96RY7 CYP3A51P-201ENST00000633513 256 ntBASIC3.34□□□□□ -1.88
IFT140Q96RY7 AC090897.3-201ENST00000636973 1157 ntBASIC3.34□□□□□ -1.88
IFT140Q96RY7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.34□□□□□ -1.88
IFT140Q96RY7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
IFT140Q96RY7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.33□□□□□ -1.88
IFT140Q96RY7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
IFT140Q96RY7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.33□□□□□ -1.88
IFT140Q96RY7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.33□□□□□ -1.88
IFT140Q96RY7 AC092473.1-201ENST00000441098 221 ntBASIC3.33□□□□□ -1.88
IFT140Q96RY7 DNAJC19P9-201ENST00000555084 351 ntBASIC3.33□□□□□ -1.88
IFT140Q96RY7 AC010546.1-201ENST00000569391 485 ntBASIC3.33□□□□□ -1.88
IFT140Q96RY7 MTCO3P13-201ENST00000577757 781 ntBASIC3.33□□□□□ -1.88
IFT140Q96RY7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.33□□□□□ -1.88
IFT140Q96RY7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
IFT140Q96RY7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.33□□□□□ -1.88
IFT140Q96RY7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
IFT140Q96RY7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
IFT140Q96RY7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.32□□□□□ -1.88
IFT140Q96RY7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.32□□□□□ -1.88
IFT140Q96RY7 RPS27P27-201ENST00000498779 255 ntBASIC3.32□□□□□ -1.88
IFT140Q96RY7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.32□□□□□ -1.88
IFT140Q96RY7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.32□□□□□ -1.88
IFT140Q96RY7 AC023043.3-201ENST00000593113 385 ntBASIC3.32□□□□□ -1.88
IFT140Q96RY7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.32□□□□□ -1.88
IFT140Q96RY7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
IFT140Q96RY7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC3.32□□□□□ -1.88
IFT140Q96RY7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
IFT140Q96RY7 AC026241.1-201ENST00000517873 2142 ntBASIC3.31□□□□□ -1.88
IFT140Q96RY7 FAM35CP-201ENST00000554755 2470 ntBASIC3.31□□□□□ -1.88
IFT140Q96RY7 RNU1-51P-201ENST00000365345 176 ntBASIC3.31□□□□□ -1.88
IFT140Q96RY7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
IFT140Q96RY7 AL021407.1-201ENST00000404531 386 ntBASIC3.31□□□□□ -1.88
IFT140Q96RY7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.31□□□□□ -1.88
IFT140Q96RY7 RPL36AP6-201ENST00000435770 321 ntBASIC3.31□□□□□ -1.88
IFT140Q96RY7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.31□□□□□ -1.88
IFT140Q96RY7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.31□□□□□ -1.88
IFT140Q96RY7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.31□□□□□ -1.88
IFT140Q96RY7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.31□□□□□ -1.88
IFT140Q96RY7 RNA5SP490-201ENST00000517141 136 ntBASIC3.31□□□□□ -1.88
IFT140Q96RY7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
IFT140Q96RY7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.31□□□□□ -1.88
IFT140Q96RY7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.31□□□□□ -1.88
IFT140Q96RY7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.31□□□□□ -1.88
IFT140Q96RY7 AC010678.1-201ENST00000614118 713 ntBASIC3.31□□□□□ -1.88
IFT140Q96RY7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.31□□□□□ -1.88
IFT140Q96RY7 AC000123.2-201ENST00000623124 461 ntBASIC3.31□□□□□ -1.88
IFT140Q96RY7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.31□□□□□ -1.88
IFT140Q96RY7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
IFT140Q96RY7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.3□□□□□ -1.88
IFT140Q96RY7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IFT140Q96RY7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IFT140Q96RY7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IFT140Q96RY7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.3□□□□□ -1.88
IFT140Q96RY7 SNORA51.11-201ENST00000384442 131 ntBASIC3.3□□□□□ -1.88
IFT140Q96RY7 AL445685.2-201ENST00000422551 342 ntBASIC3.3□□□□□ -1.88
IFT140Q96RY7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.3□□□□□ -1.88
IFT140Q96RY7 RPS3AP4-201ENST00000555161 764 ntBASIC3.3□□□□□ -1.88
IFT140Q96RY7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.3□□□□□ -1.88
IFT140Q96RY7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
IFT140Q96RY7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.3□□□□□ -1.88
IFT140Q96RY7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IFT140Q96RY7 AP001486.2-201ENST00000561652 5113 ntBASIC3.29□□□□□ -1.88
IFT140Q96RY7 RNU1-138P-201ENST00000384093 164 ntBASIC3.29□□□□□ -1.88
IFT140Q96RY7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.29□□□□□ -1.88
IFT140Q96RY7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.29□□□□□ -1.88
IFT140Q96RY7 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.29□□□□□ -1.88
IFT140Q96RY7 AC007536.1-201ENST00000533382 349 ntBASIC3.29□□□□□ -1.88
IFT140Q96RY7 OR4T1P-201ENST00000554933 911 ntBASIC3.29□□□□□ -1.88
IFT140Q96RY7 MIR4303-201ENST00000581299 66 ntBASIC3.29□□□□□ -1.88
IFT140Q96RY7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
IFT140Q96RY7 AC093909.5-201ENST00000621839 1799 ntBASIC3.29□□□□□ -1.88
IFT140Q96RY7 AC010733.2-201ENST00000589496 5702 ntBASIC3.29□□□□□ -1.88
IFT140Q96RY7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
IFT140Q96RY7 SEPT7P7-201ENST00000420492 1301 ntBASIC3.29□□□□□ -1.88
IFT140Q96RY7 RNA5SP344-201ENST00000411081 104 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 AL353597.2-202ENST00000434901 373 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.28□□□□□ -1.88
IFT140Q96RY7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.28□□□□□ -1.88
IFT140Q96RY7 AC010265.1-201ENST00000513509 211 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.28□□□□□ -1.88
IFT140Q96RY7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.28□□□□□ -1.88
IFT140Q96RY7 PSMA6P4-201ENST00000603247 718 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 AC083899.3-201ENST00000603413 594 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 AC084768.2-201ENST00000622736 221 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
IFT140Q96RY7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
IFT140Q96RY7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
IFT140Q96RY7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
IFT140Q96RY7 SNORA67.5-201ENST00000391036 107 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 RPS27P5-201ENST00000444247 244 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 RPL7P5-201ENST00000471472 736 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 AC067805.1-201ENST00000559344 470 ntBASIC3.28□□□□□ -1.88
IFT140Q96RY7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.28□□□□□ -1.88
IFT140Q96RY7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.27□□□□□ -1.89
IFT140Q96RY7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms