Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DUX3Q96PT4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DUX3Q96PT4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 SNORA51.6-201ENST00000384151 125 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 MIR649-201ENST00000384843 97 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DUX3Q96PT4 GSTA9P-201ENST00000406231 611 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 FCF1P10-201ENST00000407590 479 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 RN7SKP235-201ENST00000410662 305 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AL359704.1-201ENST00000411586 781 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AMD1P2-201ENST00000412936 992 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 MTCYBP24-201ENST00000420387 1106 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC233728.2-201ENST00000425348 757 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 COX6B1P7-201ENST00000430845 235 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 OR4C10P-201ENST00000434991 931 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC073614.1-201ENST00000438690 650 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC114495.1-201ENST00000441274 436 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AP000542.1-201ENST00000448473 371 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC092001.1-201ENST00000453012 261 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 HMGN2P7-201ENST00000456186 273 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AF213884.1-201ENST00000488102 463 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 RPL35P6-201ENST00000490024 372 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AP001086.1-201ENST00000494882 321 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 PRDX4P1-201ENST00000507189 574 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 ARL4AP2-201ENST00000507378 601 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC006390.1-201ENST00000508068 283 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC074344.1-201ENST00000512823 224 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 MTCO2P4-201ENST00000517968 247 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AP003730.1-201ENST00000524605 285 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 OR5AP1P-201ENST00000529730 940 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DUX3Q96PT4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC091304.9-201ENST00000612091 226 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC136475.10-201ENST00000620253 385 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
DUX3Q96PT4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.32□□□□□ -1.88
DUX3Q96PT4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
DUX3Q96PT4 CCT4P2-201ENST00000233836 1548 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 AC092162.3-201ENST00000624511 1624 ntBASIC3.32□□□□□ -1.88
DUX3Q96PT4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
DUX3Q96PT4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DUX3Q96PT4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DUX3Q96PT4 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 SPRR2C-201ENST00000290702 219 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DUX3Q96PT4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DUX3Q96PT4 RNU6-282P-201ENST00000365357 103 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 Y_RNA.453-201ENST00000384223 109 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 RNU1-44P-201ENST00000384453 163 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 Y_RNA.548-201ENST00000384656 105 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 MTCO3P40-201ENST00000392516 676 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 AL022722.2-201ENST00000402519 180 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 RNA5SP317-201ENST00000410176 116 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 RNA5SP104-201ENST00000410989 118 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 RN7SKP263-201ENST00000411194 309 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 RNA5SP311-201ENST00000411290 116 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 SPA17P1-201ENST00000416656 452 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 RPL31P35-201ENST00000431058 377 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 MTCYBP45-201ENST00000435243 565 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC104850.1-201ENST00000435940 476 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DUX3Q96PT4 MTND4P25-201ENST00000441039 533 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 RPL23AP16-201ENST00000441715 421 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 RPL17P49-201ENST00000443728 411 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 MTCO3P2-201ENST00000457365 171 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC026410.2-201ENST00000460281 156 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 RPL30P11-201ENST00000495304 339 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC019235.1-201ENST00000503847 207 ntBASIC3.31□□□□□ -1.88
DUX3Q96PT4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.31□□□□□ -1.88
DUX3Q96PT4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms