Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC026634.1-201ENST00000634369 198 ntBASIC3.16□□□□□ -1.9
RPRD1AQ96P16 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPRD1AQ96P16 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RPRD1AQ96P16 OR5H2-201ENST00000355273 945 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RPRD1AQ96P16 SNORA63.3-201ENST00000362682 132 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 U3.11-201ENST00000364476 212 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 SNORA71.1-201ENST00000364523 117 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPRD1AQ96P16 SNORA54-201ENST00000384281 123 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 MIR128-1-201ENST00000384921 82 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.15□□□□□ -1.91
RPRD1AQ96P16 MRPL50P2-201ENST00000416821 482 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.15□□□□□ -1.91
RPRD1AQ96P16 AC012497.1-201ENST00000429392 575 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.15□□□□□ -1.91
RPRD1AQ96P16 HMGB3P6-201ENST00000444896 598 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 GAPDHP27-201ENST00000447427 1020 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 MTCO1P48-201ENST00000448024 1096 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.15□□□□□ -1.91
RPRD1AQ96P16 AC093801.2-201ENST00000503966 1050 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 ARL4AP2-201ENST00000507378 601 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RPRD1AQ96P16 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.15□□□□□ -1.91
RPRD1AQ96P16 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.15□□□□□ -1.91
RPRD1AQ96P16 snoZ278.1-201ENST00000517059 112 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 EEF1B2P4-201ENST00000551398 348 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 AC044913.1-201ENST00000557200 430 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 AC122134.1-202ENST00000569111 1201 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.15□□□□□ -1.91
RPRD1AQ96P16 MTATP6P2-201ENST00000603319 678 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 BNIP3P11-201ENST00000603878 563 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 AC008759.3-201ENST00000613300 508 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 AL353748.2-201ENST00000622148 471 ntBASIC3.15□□□□□ -1.91
RPRD1AQ96P16 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPRD1AQ96P16 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 MIR148B-201ENST00000362252 99 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 RNU5B-4P-201ENST00000363508 111 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 SNORA48.2-201ENST00000390926 124 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 RN7SKP220-201ENST00000410611 288 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 RPL21P32-201ENST00000419877 477 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 UBE2D3P2-201ENST00000424409 445 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AC093151.1-201ENST00000427711 313 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AC104332.2-201ENST00000429959 156 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 FTH1P1-201ENST00000437933 532 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 RPS12P18-201ENST00000442381 270 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 MRPL42P4-201ENST00000453267 443 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AC244505.3-201ENST00000454598 187 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 RPS23P3-201ENST00000470993 430 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 DYNLL1P6-201ENST00000503440 264 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AC090502.2-201ENST00000549267 280 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 RPL21P136-201ENST00000605378 396 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AC120053.1-201ENST00000607706 736 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AL355810.1-201ENST00000614629 552 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AC022509.4-201ENST00000621404 572 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AC006111.3-201ENST00000622137 383 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AC095031.1-201ENST00000623685 672 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AC091925.2-201ENST00000625059 256 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 LRRC77P-213ENST00000637727 880 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 ZNF663P-202ENST00000641770 1131 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 ZNF833P-201ENST00000424938 1494 ntBASIC3.14□□□□□ -1.91
RPRD1AQ96P16 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPRD1AQ96P16 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 GNG5P1-201ENST00000255500 204 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 U8.9-201ENST00000365667 134 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 RNU6-1074P-201ENST00000383995 104 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 SNORA26.7-201ENST00000391288 122 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 ARF4P3-201ENST00000397387 509 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AL603865.2-201ENST00000401679 213 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC099677.1-201ENST00000420575 175 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 MTCO3P1-205ENST00000422088 832 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC092634.2-201ENST00000428146 1010 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms