Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPL38P1-201ENST00000460914 211 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC092989.1-201ENST00000481235 277 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC041039.1-201ENST00000485656 536 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 ARL4AP2-201ENST00000507378 601 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC009646.1-201ENST00000510455 318 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AF186190.1-201ENST00000517470 480 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 OR5AQ1P-201ENST00000527596 927 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 HMGB1P33-201ENST00000563485 527 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC104662.1-201ENST00000604448 511 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AL451044.1-201ENST00000604867 238 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC121334.2-201ENST00000605387 271 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AP005264.7-201ENST00000625003 745 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 MTND5P33-201ENST00000571250 1450 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 RNU6-97P-201ENST00000363387 104 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 RNY4P14-201ENST00000363656 96 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 RNU5E-4P-201ENST00000364931 120 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 SNORA68.2-201ENST00000391263 128 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 ELOCP19-201ENST00000411919 318 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 EZH2P1-201ENST00000431167 291 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC104850.1-201ENST00000435940 476 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AL049734.2-201ENST00000441066 616 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 RPS4XP4-201ENST00000443195 763 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 HMGB3P21-201ENST00000452483 547 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC007686.1-201ENST00000488511 463 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 FCF1P3-201ENST00000496394 590 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 OR5H5P-201ENST00000503164 928 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 NPM1P41-201ENST00000512920 831 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC107918.3-201ENST00000533272 382 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC055876.5-201ENST00000605667 259 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC128687.2-201ENST00000609657 566 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AL161734.1-201ENST00000609720 557 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC091905.1-201ENST00000624400 311 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 AC116667.1-201ENST00000604855 2072 ntBASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4AQ8WYN0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 ZNF734P-201ENST00000419494 1534 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 SNORD35B-201ENST00000363660 87 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 RNVU1-3-201ENST00000364313 161 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 RNU6-359P-201ENST00000365466 108 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 Y_RNA.390-201ENST00000383932 102 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 Y_RNA.402-201ENST00000383972 102 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 Y_RNA.453-201ENST00000384223 109 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 RNU6-780P-201ENST00000391030 104 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 U3.22-201ENST00000391120 215 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 RNU2-15P-201ENST00000410692 191 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC127391.1-201ENST00000411737 98 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 USP9YP6-201ENST00000413550 854 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC004987.3-201ENST00000413879 771 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 RPL30P16-201ENST00000419341 429 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms