Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AL033528.1-201ENST00000453780 140 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AC012158.1-204ENST00000483430 465 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 LARP1BP2-201ENST00000486594 519 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 BNIP3P41-201ENST00000503774 571 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 RNU6-201P-201ENST00000517100 61 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 OR5M7P-201ENST00000526140 972 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 PHBP17-201ENST00000528576 541 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AP002453.2-201ENST00000533503 320 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 CR383656.7-201ENST00000548164 174 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AC063950.1-201ENST00000552036 308 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 SETP2-201ENST00000553886 926 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 RPL23AP87-202ENST00000573039 466 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AC087683.1-201ENST00000591187 441 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AL139286.2-201ENST00000606838 396 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 EOGT-210ENST00000615922 1931 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AC108479.2-201ENST00000617314 601 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AC009902.3-201ENST00000606235 2172 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 MIR30B-201ENST00000384850 88 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 RN7SKP156-201ENST00000410308 342 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 SNORA57.3-201ENST00000411095 141 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 CRYBB2P1-203ENST00000415709 538 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 USP9YP14-201ENST00000430663 563 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 RPL22P17-201ENST00000438729 315 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 NOTCH2P1-201ENST00000443481 624 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 RPS11P1-201ENST00000451072 473 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 MTND1P27-201ENST00000451117 902 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 RPL36AP13-201ENST00000457490 317 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 TPT1P7-201ENST00000458300 517 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 RN7SL323P-201ENST00000494712 295 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 IGLV3-26-201ENST00000520756 302 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AC009977.1-201ENST00000586015 570 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 SLC25A36P1-201ENST00000590111 465 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AC079089.3-201ENST00000603094 673 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AC131902.3-201ENST00000611767 581 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 LINC00901.1-201ENST00000617252 152 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AC138932.5-201ENST00000617759 563 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AL590240.3-201ENST00000621416 943 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AC079597.1-201ENST00000624306 508 ntBASIC4.07□□□□□ -1.76
HMGB4Q8WW32 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGB4Q8WW32 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 Y_RNA.333-201ENST00000365274 102 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 RAB9AP3-201ENST00000412737 573 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AL358472.1-201ENST00000431295 329 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 UBE2V1P13-201ENST00000436983 439 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 HMGN2P21-201ENST00000447764 270 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 RAB9AP1-201ENST00000449393 573 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC098824.1-201ENST00000453565 980 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms