Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.52□□□□□ -2.17
ALMS1Q8TCU4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.52□□□□□ -2.17
ALMS1Q8TCU4 AC245517.5-201ENST00000611529 162 ntBASIC1.52□□□□□ -2.17
ALMS1Q8TCU4 AC090617.7-201ENST00000623952 126 ntBASIC1.52□□□□□ -2.17
ALMS1Q8TCU4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
ALMS1Q8TCU4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.52□□□□□ -2.17
ALMS1Q8TCU4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 SNORD88.1-201ENST00000408684 91 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 LUZP4P1-201ENST00000415420 344 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 TAF9P1-201ENST00000445421 515 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 TAF9P2-201ENST00000454958 515 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC007182.2-201ENST00000489251 402 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 TRMT112P2-201ENST00000512910 132 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 MIR3670-2-201ENST00000582974 65 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 MIR3670-1-201ENST00000584160 65 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 MIR3670-3-201ENST00000584855 65 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC023043.3-201ENST00000593113 385 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 MIR3670-4-201ENST00000612260 65 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 MIR1276-201ENST00000408707 83 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC098826.1-201ENST00000433943 471 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AL356575.1-201ENST00000603008 283 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 VTRNA1-1-201ENST00000363120 99 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 MIR9-3-201ENST00000385084 90 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 MIR6073-201ENST00000352083 89 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 RNU6-14P-201ENST00000384630 106 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 RNA5SP210-201ENST00000391034 120 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC107081.1-201ENST00000414975 361 ntBASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.51□□□□□ -2.17
ALMS1Q8TCU4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 SETP2-201ENST00000553886 926 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AC105137.2-201ENST00000569073 466 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AC019159.1-201ENST00000605094 187 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 SNORA67.3-201ENST00000384366 140 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AC027673.1-201ENST00000456245 405 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 YWHAEP7-203ENST00000622054 312 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 CYP3A51P-201ENST00000633513 256 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 RNA5SP181-201ENST00000410246 98 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AL158825.1-201ENST00000414735 521 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AC013410.1-201ENST00000436223 1232 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 HSPE1P22-201ENST00000456856 327 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 CCNHP1-201ENST00000513311 678 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 YWHAQP7-201ENST00000603536 658 ntBASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ALMS1Q8TCU4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 SNORA51.11-201ENST00000384442 131 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AC009965.2-201ENST00000425328 970 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 Z82205.1-201ENST00000428456 297 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 CACYBPP1-201ENST00000438592 684 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 RPL38P4-201ENST00000502376 214 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms