Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AL807761.1-201ENST00000417622 171 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 BX119904.4-201ENST00000424402 301 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 TRIAP1P1-201ENST00000427062 225 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 AL117339.2-201ENST00000430475 180 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 TRIM60P18-201ENST00000441518 828 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 AC112653.1-201ENST00000443851 386 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 AC009237.8-201ENST00000445492 379 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 SETP11-201ENST00000473027 690 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 RPS3AP50-201ENST00000487064 803 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 AC006483.1-201ENST00000487308 313 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 RN7SL323P-201ENST00000494712 295 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 CEACAMP10-202ENST00000495431 496 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 RNA5SP216-201ENST00000516111 123 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC89Q8N998 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 GLUD1P4-201ENST00000590914 418 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 AL596327.1-201ENST00000603629 213 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 AL133507.1-201ENST00000605269 557 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 MIR6758-201ENST00000620653 63 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 AC079228.1-201ENST00000624774 1049 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC89Q8N998 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC89Q8N998 TNPO1P3-201ENST00000436471 2662 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.81□□□□□ -1.8
CCDC89Q8N998 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC89Q8N998 AC073073.2-201ENST00000609827 2578 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC89Q8N998 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 PWAR6-201ENST00000552334 4618 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC89Q8N998 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC89Q8N998 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC89Q8N998 RNU5E-8P-201ENST00000363502 116 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 RNU6-799P-201ENST00000363567 107 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 RNU6-289P-201ENST00000364093 107 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 CD24P4-201ENST00000382840 243 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 RPL36AP36-201ENST00000418616 301 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 RPL7L1P10-201ENST00000427790 463 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 MTND3P1-201ENST00000441336 220 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 MTND2P24-201ENST00000453434 806 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 AC034236.1-201ENST00000469891 373 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 FABP5P12-201ENST00000515543 389 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 HMGN1P28-201ENST00000521340 364 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 OR5G4P-201ENST00000525251 760 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AP000926.4-201ENST00000527351 454 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AP003497.1-201ENST00000528472 562 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 CYCSP30-201ENST00000546447 172 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 HMGB1P14-201ENST00000557424 591 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 AC005951.1-201ENST00000576706 485 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 MIR4425-201ENST00000580572 84 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 AL592221.1-201ENST00000605266 382 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AC016597.2-201ENST00000613256 341 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AC009268.2-201ENST00000621925 457 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 AC244258.1-201ENST00000637553 1071 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC89Q8N998 AL079305.1-201ENST00000623159 3008 ntBASIC3.8□□□□□ -1.8
CCDC89Q8N998 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC89Q8N998 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC89Q8N998 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC89Q8N998 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC89Q8N998 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC89Q8N998 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC126755.2-208ENST00000327792 462 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC138969.1-213ENST00000331436 462 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC89Q8N998 RNU6-744P-201ENST00000365557 107 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC89Q8N998 SNORA56-201ENST00000383966 129 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 RNU6-1316P-201ENST00000384242 108 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 SNORA36C-201ENST00000384289 132 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms