Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC007182.2-201ENST00000489251 402 ntBASIC3.04□□□□□ -1.92
VPS8Q8N3P4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS8Q8N3P4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS8Q8N3P4 AC068714.1-201ENST00000559623 800 ntBASIC3.04□□□□□ -1.92
VPS8Q8N3P4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS8Q8N3P4 OR4K7P-201ENST00000580232 945 ntBASIC3.04□□□□□ -1.92
VPS8Q8N3P4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS8Q8N3P4 DUXAP3-201ENST00000603616 594 ntBASIC3.04□□□□□ -1.92
VPS8Q8N3P4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.04□□□□□ -1.92
VPS8Q8N3P4 DCAF13P1-201ENST00000495256 1330 ntBASIC3.04□□□□□ -1.92
VPS8Q8N3P4 AC022031.1-201ENST00000585985 2593 ntBASIC3.04□□□□□ -1.92
VPS8Q8N3P4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VPS8Q8N3P4 AC117529.2-201ENST00000512159 2068 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AL356292.1-201ENST00000283110 373 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 RNA5SP295-201ENST00000362655 121 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS8Q8N3P4 WARS2P1-201ENST00000429678 537 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AC010683.1-201ENST00000473673 378 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 RPS26P21-201ENST00000475397 348 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AC109486.1-201ENST00000486833 374 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AC098799.2-201ENST00000509466 868 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 FABP5P6-201ENST00000510588 409 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AL121917.1-203ENST00000605534 577 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AC092954.1-201ENST00000609121 445 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AC005156.1-201ENST00000613371 573 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AP000553.5-201ENST00000641933 54 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 AC103988.1-201ENST00000566382 2177 ntBASIC3.03□□□□□ -1.92
VPS8Q8N3P4 RN7SKP226-201ENST00000364912 300 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 AC089999.1-201ENST00000460336 374 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 RN7SKP5-201ENST00000517045 272 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 AC034268.2-201ENST00000571784 482 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 RNU6-482P-201ENST00000391068 107 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 AL590664.1-201ENST00000448065 339 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 HMGB1P15-201ENST00000453854 435 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 OR52A4P-203ENST00000498233 1014 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 SNORA31.15-201ENST00000516771 132 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 RN7SKP282-201ENST00000516824 299 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 COX6CP5-201ENST00000527162 228 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 AL121839.1-201ENST00000556233 1185 ntBASIC3.02□□□□□ -1.93
VPS8Q8N3P4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.02□□□□□ -1.93
VPS8Q8N3P4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS8Q8N3P4 AC025125.1-201ENST00000624743 1922 ntBASIC3.01□□□□□ -1.93
VPS8Q8N3P4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS8Q8N3P4 AC093392.2-201ENST00000450682 337 ntBASIC3.01□□□□□ -1.93
VPS8Q8N3P4 MTCYBP14-201ENST00000457471 715 ntBASIC3.01□□□□□ -1.93
VPS8Q8N3P4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS8Q8N3P4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS8Q8N3P4 AL163153.1-201ENST00000554223 283 ntBASIC3.01□□□□□ -1.93
VPS8Q8N3P4 AC010735.1-201ENST00000567305 1026 ntBASIC3.01□□□□□ -1.93
VPS8Q8N3P4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS8Q8N3P4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS8Q8N3P4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS8Q8N3P4 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
VPS8Q8N3P4 VN1R48P-201ENST00000448149 1036 ntBASIC3□□□□□ -1.93
VPS8Q8N3P4 FABP5P13-201ENST00000452144 328 ntBASIC3□□□□□ -1.93
VPS8Q8N3P4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3□□□□□ -1.93
VPS8Q8N3P4 ARPC3P2-201ENST00000457786 533 ntBASIC3□□□□□ -1.93
VPS8Q8N3P4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3□□□□□ -1.93
VPS8Q8N3P4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3□□□□□ -1.93
VPS8Q8N3P4 AC068339.2-201ENST00000534395 618 ntBASIC3□□□□□ -1.93
VPS8Q8N3P4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
VPS8Q8N3P4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS8Q8N3P4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS8Q8N3P4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS8Q8N3P4 FAM133CP-201ENST00000332869 704 ntBASIC2.99□□□□□ -1.93
VPS8Q8N3P4 AL358453.1-201ENST00000422522 250 ntBASIC2.99□□□□□ -1.93
VPS8Q8N3P4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS8Q8N3P4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS8Q8N3P4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS8Q8N3P4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS8Q8N3P4 HAUS1P1-201ENST00000505275 832 ntBASIC2.99□□□□□ -1.93
VPS8Q8N3P4 SNORA31.26-201ENST00000517250 137 ntBASIC2.99□□□□□ -1.93
VPS8Q8N3P4 MTCYBP28-201ENST00000566728 1132 ntBASIC2.99□□□□□ -1.93
VPS8Q8N3P4 AC002984.1-201ENST00000591692 448 ntBASIC2.99□□□□□ -1.93
VPS8Q8N3P4 AL133393.1-201ENST00000603277 287 ntBASIC2.99□□□□□ -1.93
VPS8Q8N3P4 RPAP2P1-201ENST00000603626 1168 ntBASIC2.99□□□□□ -1.93
VPS8Q8N3P4 VN1R9P-201ENST00000614184 867 ntBASIC2.99□□□□□ -1.93
VPS8Q8N3P4 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS8Q8N3P4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.99□□□□□ -1.93
VPS8Q8N3P4 FAM35CP-201ENST00000554755 2470 ntBASIC2.98□□□□□ -1.93
VPS8Q8N3P4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
VPS8Q8N3P4 AP000567.1-201ENST00000406413 156 ntBASIC2.98□□□□□ -1.93
VPS8Q8N3P4 HSPE1P28-201ENST00000443139 211 ntBASIC2.98□□□□□ -1.93
VPS8Q8N3P4 RPL7P52-201ENST00000449200 742 ntBASIC2.98□□□□□ -1.93
VPS8Q8N3P4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms