Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC011477.1-204ENST00000623416 1325 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 RNU6-1155P-201ENST00000363554 107 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 RNU1-101P-201ENST00000391171 127 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC083875.1-201ENST00000419509 405 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 RPL27AP8-201ENST00000424277 446 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC079780.1-201ENST00000428259 207 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 Z82190.1-201ENST00000454534 490 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 BTF3P5-201ENST00000457252 467 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 RPL21P8-201ENST00000465083 535 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 RPS3AP22-201ENST00000488297 769 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 COX7A2P2-201ENST00000505291 250 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 COX6CP8-201ENST00000522620 226 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC024224.1-201ENST00000538284 609 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 OR7K1P-201ENST00000546439 926 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 SETP7-201ENST00000552169 453 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 RN7SL703P-201ENST00000578485 302 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC008751.2-201ENST00000597885 980 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AL020997.2-201ENST00000602607 184 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AL390208.1-201ENST00000605885 644 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AL360219.1-201ENST00000610230 366 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AL596245.1-201ENST00000618994 362 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 Z99129.2-201ENST00000619967 314 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AL353748.2-201ENST00000622148 471 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 AC019226.2-201ENST00000625973 424 ntBASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.55□□□□□ -1.84
NUP54Q7Z3B4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 RNA5SP322-201ENST00000363617 119 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 RNU1-64P-201ENST00000365443 163 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 RNU1-89P-201ENST00000384592 164 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 RNU6-253P-201ENST00000384730 105 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 MIR30B-201ENST00000384850 88 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 HMGN2P8-201ENST00000391458 268 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AL136372.1-201ENST00000403060 228 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AL445189.1-201ENST00000405722 338 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AL356131.1-201ENST00000405826 414 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 Z98941.1-201ENST00000407764 100 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AC127526.1-201ENST00000417526 366 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 RPL17P36-201ENST00000420302 549 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 RPS29P7-201ENST00000439662 171 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 SDCBPP1-201ENST00000440192 890 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 MTND5P14-201ENST00000441481 1267 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AL591503.2-201ENST00000442314 1005 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 CDC27P1-201ENST00000445384 715 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 RPS17P13-201ENST00000448974 407 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 BX322784.1-201ENST00000455793 1077 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AC010265.1-201ENST00000513509 211 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AC010342.1-201ENST00000514047 877 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 SUMO2P20-201ENST00000520803 283 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 MRPS36P5-201ENST00000551909 298 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 MTND3P12-201ENST00000559068 328 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AC090877.1-201ENST00000561418 344 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 HSPE1P5-201ENST00000561489 272 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AP000811.1-201ENST00000603803 651 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AL031176.1-201ENST00000604554 466 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AC012443.1-201ENST00000605605 231 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AC024560.3-201ENST00000608482 349 ntBASIC3.54□□□□□ -1.84
NUP54Q7Z3B4 AC009570.1-201ENST00000609599 745 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms