Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 AC084768.2-201ENST00000622736 221 ntBASIC2.45□□□□□ -2.02
UBR3Q6ZT12 AC092447.7-201ENST00000422212 1621 ntBASIC2.45□□□□□ -2.02
UBR3Q6ZT12 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 BTF3P4-201ENST00000418852 495 ntBASIC2.45□□□□□ -2.02
UBR3Q6ZT12 AL358453.1-201ENST00000422522 250 ntBASIC2.45□□□□□ -2.02
UBR3Q6ZT12 AL353729.1-201ENST00000425044 720 ntBASIC2.45□□□□□ -2.02
UBR3Q6ZT12 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 RNU6-964P-201ENST00000516524 69 ntBASIC2.45□□□□□ -2.02
UBR3Q6ZT12 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.45□□□□□ -2.02
UBR3Q6ZT12 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
UBR3Q6ZT12 AL359715.4-201ENST00000606629 1436 ntBASIC2.45□□□□□ -2.02
UBR3Q6ZT12 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.44□□□□□ -2.02
UBR3Q6ZT12 AC006378.2-201ENST00000623178 2476 ntBASIC2.44□□□□□ -2.02
UBR3Q6ZT12 AC106901.1-201ENST00000425086 698 ntBASIC2.44□□□□□ -2.02
UBR3Q6ZT12 MTND4LP12-201ENST00000448237 295 ntBASIC2.44□□□□□ -2.02
UBR3Q6ZT12 AC008571.1-201ENST00000467232 300 ntBASIC2.44□□□□□ -2.02
UBR3Q6ZT12 AP000852.1-201ENST00000472460 573 ntBASIC2.44□□□□□ -2.02
UBR3Q6ZT12 snoZ278.1-201ENST00000517059 112 ntBASIC2.44□□□□□ -2.02
UBR3Q6ZT12 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.44□□□□□ -2.02
UBR3Q6ZT12 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.44□□□□□ -2.02
UBR3Q6ZT12 NF1P5-201ENST00000588287 448 ntBASIC2.44□□□□□ -2.02
UBR3Q6ZT12 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.44□□□□□ -2.02
UBR3Q6ZT12 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.44□□□□□ -2.02
UBR3Q6ZT12 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.44□□□□□ -2.02
UBR3Q6ZT12 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
UBR3Q6ZT12 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AC129850.1-201ENST00000436203 508 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AC140059.1-201ENST00000489238 361 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AC005840.1-201ENST00000498412 377 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AC108078.2-201ENST00000510750 236 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 RNA5SP182-201ENST00000516064 82 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 RPP40P2-201ENST00000603596 712 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 Y_RNA.40-201ENST00000362645 93 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 Y_RNA.269-201ENST00000364685 89 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 U8.9-201ENST00000365667 134 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 SNORA67.5-201ENST00000391036 107 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AL021407.1-201ENST00000404531 386 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 MTND5P7-201ENST00000413558 1798 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 ATP5F1P1-201ENST00000433775 569 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AC124916.1-201ENST00000444020 547 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 AC010297.1-201ENST00000623948 149 ntBASIC2.43□□□□□ -2.02
UBR3Q6ZT12 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
UBR3Q6ZT12 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
UBR3Q6ZT12 SDR42E1P3-201ENST00000438345 502 ntBASIC2.42□□□□□ -2.02
UBR3Q6ZT12 AC009237.8-201ENST00000445492 379 ntBASIC2.42□□□□□ -2.02
UBR3Q6ZT12 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.42□□□□□ -2.02
UBR3Q6ZT12 C2orf27A-204ENST00000623058 969 ntBASIC2.42□□□□□ -2.02
UBR3Q6ZT12 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.42□□□□□ -2.02
UBR3Q6ZT12 RNA5SP344-201ENST00000411081 104 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 MTCO3P30-201ENST00000426425 670 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AL138787.1-202ENST00000437804 898 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AL591719.1-201ENST00000444669 744 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AC126177.3-201ENST00000551839 688 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AC005951.1-201ENST00000576706 485 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AC107021.2-201ENST00000567714 2095 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
UBR3Q6ZT12 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 CR769767.1-201ENST00000436337 346 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AL590762.3-201ENST00000436372 640 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 TAF9P1-201ENST00000445421 515 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AC011753.1-201ENST00000451001 220 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.41□□□□□ -2.02
UBR3Q6ZT12 TAF9P2-201ENST00000454958 515 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AP003385.6-201ENST00000531603 374 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.41□□□□□ -2.02
UBR3Q6ZT12 OR1S1-201ENST00000624470 978 ntBASIC2.41□□□□□ -2.02
UBR3Q6ZT12 AC004520.1-201ENST00000608362 1413 ntBASIC2.4□□□□□ -2.02
UBR3Q6ZT12 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
UBR3Q6ZT12 SNORA51.11-201ENST00000384442 131 ntBASIC2.4□□□□□ -2.03
UBR3Q6ZT12 HSPE1P26-201ENST00000405341 275 ntBASIC2.4□□□□□ -2.03
UBR3Q6ZT12 AC009961.3-201ENST00000449832 765 ntBASIC2.4□□□□□ -2.03
UBR3Q6ZT12 snoU13.18-201ENST00000459483 104 ntBASIC2.4□□□□□ -2.03
UBR3Q6ZT12 MTAPP1-201ENST00000489154 819 ntBASIC2.4□□□□□ -2.03
UBR3Q6ZT12 TBCAP3-201ENST00000512475 312 ntBASIC2.4□□□□□ -2.03
UBR3Q6ZT12 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.4□□□□□ -2.03
UBR3Q6ZT12 AL159169.2-201ENST00000610061 1269 ntBASIC2.4□□□□□ -2.03
UBR3Q6ZT12 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.4□□□□□ -2.03
UBR3Q6ZT12 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms