Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MIR2276-201ENST00000516886 89 ntBASIC3.47□□□□□ -1.85
CASC4Q6P4E1 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
CASC4Q6P4E1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 AC020914.6-201ENST00000594327 272 ntBASIC3.47□□□□□ -1.85
CASC4Q6P4E1 AC006557.5-201ENST00000603126 811 ntBASIC3.47□□□□□ -1.85
CASC4Q6P4E1 AC099778.2-201ENST00000610904 211 ntBASIC3.47□□□□□ -1.85
CASC4Q6P4E1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 AP000484.1-201ENST00000620067 1252 ntBASIC3.47□□□□□ -1.85
CASC4Q6P4E1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.47□□□□□ -1.85
CASC4Q6P4E1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
CASC4Q6P4E1 AC118273.1-201ENST00000525324 3006 ntBASIC3.46□□□□□ -1.85
CASC4Q6P4E1 MFSD8-233ENST00000641482 4860 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AC007496.3-201ENST00000624987 3443 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 RNU6-28P-201ENST00000362378 107 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 RPL36AP36-201ENST00000418616 301 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 TXNP1-201ENST00000441872 371 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AC073387.1-201ENST00000453261 709 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 RPL23AP31-201ENST00000456160 467 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AC104619.4-201ENST00000510773 249 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AC108043.1-201ENST00000512696 574 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AC110760.3-202ENST00000515177 371 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 RNA5SP468-201ENST00000516782 93 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 MTCO1P49-201ENST00000523429 802 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AL031176.1-201ENST00000604554 466 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AL158042.1-201ENST00000605338 460 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AL445264.1-201ENST00000621719 171 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 AC068787.1-201ENST00000623908 691 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 SNORA50A-202ENST00000629536 136 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CASC4Q6P4E1 MTND4P34-201ENST00000572715 1371 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 ZNF876P-202ENST00000398732 1485 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 ZNF285B-201ENST00000561698 1767 ntBASIC3.46□□□□□ -1.86
CASC4Q6P4E1 ZNF542P-204ENST00000482727 1305 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 MIR135A2-201ENST00000384854 100 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 SNORA48.8-201ENST00000391324 134 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 ANAPC10P1-201ENST00000395991 556 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 RNU6-757P-201ENST00000410334 100 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 USP9YP33-201ENST00000412220 421 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 MTCYBP38-201ENST00000417160 1123 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 SSXP9-201ENST00000417503 292 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 YPEL5P1-201ENST00000419731 367 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 USP9YP35-201ENST00000435696 412 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 Z80107.1-201ENST00000436830 412 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AC007967.1-201ENST00000455422 1159 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 HMGN1P18-201ENST00000457642 277 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 RPS27AP1-201ENST00000475545 471 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 GTF2IP22-201ENST00000554443 182 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 OR4K8P-201ENST00000578842 1048 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AC067852.3-201ENST00000589177 561 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 DUXAP11-201ENST00000603858 526 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AL022099.1-201ENST00000604551 712 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AC105148.1-201ENST00000604961 409 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AL357080.1-201ENST00000617394 239 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AC095031.1-201ENST00000623685 672 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AC006927.4-201ENST00000639187 543 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 AC005539.1-201ENST00000443768 1479 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 SGO1P2-201ENST00000429458 1589 ntBASIC3.45□□□□□ -1.86
CASC4Q6P4E1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CASC4Q6P4E1 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.44□□□□□ -1.86
CASC4Q6P4E1 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.44□□□□□ -1.86
CASC4Q6P4E1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CASC4Q6P4E1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms