Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 AC011260.1-201ENST00000578420 472 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 WISP1-OT1-201ENST00000602893 642 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 BBIP1P1-201ENST00000602999 279 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 AC105129.3-201ENST00000605455 485 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 OR2AS2P-201ENST00000606902 342 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.92□□□□□ -1.78
USP41Q3LFD5 AC008443.7-201ENST00000622195 246 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 AC004009.2-201ENST00000623016 728 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 AL356266.1-201ENST00000623311 483 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 AC127502.3-201ENST00000636170 1206 ntBASIC3.92□□□□□ -1.78
USP41Q3LFD5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP41Q3LFD5 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP41Q3LFD5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP41Q3LFD5 AC090337.1-201ENST00000579651 2074 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 PRO1804-201ENST00000623780 2050 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 MTND5P1-201ENST00000445440 1375 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 MTND4P16-201ENST00000466108 1367 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP41Q3LFD5 MTND5P3-201ENST00000438536 1800 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP41Q3LFD5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 RNU6-777P-201ENST00000364265 104 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP41Q3LFD5 SKINT1L-201ENST00000401057 817 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 HLFP1-201ENST00000402375 499 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 RNU2-15P-201ENST00000410692 191 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 RNU4-78P-201ENST00000410940 126 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 RPL23AP39-201ENST00000415533 405 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 MTATP6P27-201ENST00000416987 621 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 MTCYBP24-201ENST00000420387 1106 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC019178.2-201ENST00000423595 505 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AL390023.1-201ENST00000428836 262 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 UBE2FP3-201ENST00000436366 524 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP41Q3LFD5 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 MTND5P14-201ENST00000441481 1267 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 RPS27AP8-201ENST00000452665 445 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 ZNF114P1-201ENST00000453500 292 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 BX322784.1-201ENST00000455793 1077 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AL122001.1-201ENST00000457027 370 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 RPS20P24-201ENST00000457473 361 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 RPL31P50-201ENST00000471002 296 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC017015.1-201ENST00000477387 286 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 MTND5P4-201ENST00000514978 288 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC087276.1-201ENST00000529659 480 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC107954.1-201ENST00000565906 727 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC136618.2-201ENST00000575091 400 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 MTCYBP22-201ENST00000603788 447 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC006329.2-201ENST00000611491 394 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC093783.1-201ENST00000612976 329 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP41Q3LFD5 AC073346.2-201ENST00000624724 2058 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
USP41Q3LFD5 MFSD8-236ENST00000641509 4050 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AL513185.3-201ENST00000433335 1300 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AL049781.1-201ENST00000623195 3585 ntBASIC3.91□□□□□ -1.78
USP41Q3LFD5 AL365440.1-201ENST00000436135 2167 ntBASIC3.9□□□□□ -1.78
USP41Q3LFD5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
USP41Q3LFD5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.9□□□□□ -1.78
USP41Q3LFD5 AC007823.1-201ENST00000569932 1566 ntBASIC3.9□□□□□ -1.78
USP41Q3LFD5 XIAPP3-201ENST00000312918 795 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 RNU6-989P-201ENST00000362756 107 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 RNA5SP50-201ENST00000363731 107 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 SNORA9-201ENST00000384215 133 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 HMGB1P11-201ENST00000413899 637 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AL590233.1-201ENST00000430017 456 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 AL831737.1-201ENST00000441288 271 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC002381.1-201ENST00000447049 280 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 PAXBP1P1-201ENST00000449315 447 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 RPL30P9-201ENST00000465586 330 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 AL358832.1-201ENST00000497800 389 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC112198.1-201ENST00000505369 1220 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC105313.1-201ENST00000509121 353 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms