Protein–RNA interactions for Protein: Q15459

SF3A1, Splicing factor 3A subunit 1, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1Q15459 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.26□□□□□ -1.57
SF3A1Q15459 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.26□□□□□ -1.57
SF3A1Q15459 RPL21P91-201ENST00000429231 479 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 MTATP6P13-201ENST00000438531 667 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.26□□□□□ -1.57
SF3A1Q15459 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.26□□□□□ -1.57
SF3A1Q15459 AC093392.2-201ENST00000450682 337 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 ISCUP1-201ENST00000454451 448 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 RPS3AP41-201ENST00000462701 778 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AC006463.2-201ENST00000473326 348 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.26□□□□□ -1.57
SF3A1Q15459 AC108860.1-201ENST00000484521 383 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 DEFB109F-201ENST00000491870 277 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AC079382.1-201ENST00000493346 557 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AC083829.1-201ENST00000503756 657 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.26□□□□□ -1.57
SF3A1Q15459 AC021146.3-201ENST00000511911 260 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.26□□□□□ -1.57
SF3A1Q15459 RNU2-10P-201ENST00000516375 211 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.26□□□□□ -1.57
SF3A1Q15459 AC124947.2-202ENST00000552735 133 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.26□□□□□ -1.57
SF3A1Q15459 RPL21P12-201ENST00000559810 515 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AC027807.1-201ENST00000559921 996 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.26□□□□□ -1.57
SF3A1Q15459 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.26□□□□□ -1.57
SF3A1Q15459 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.26□□□□□ -1.57
SF3A1Q15459 AC103710.2-201ENST00000609912 942 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 AC244100.1-202ENST00000621554 382 ntBASIC5.26□□□□□ -1.57
SF3A1Q15459 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.26□□□□□ -1.57
SF3A1Q15459 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SF3A1Q15459 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SF3A1Q15459 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.26□□□□□ -1.57
SF3A1Q15459 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SF3A1Q15459 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SF3A1Q15459 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.26□□□□□ -1.57
SF3A1Q15459 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.25□□□□□ -1.57
SF3A1Q15459 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SF3A1Q15459 AC108467.2-201ENST00000617640 1597 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.25□□□□□ -1.57
SF3A1Q15459 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SF3A1Q15459 RNU6-169P-201ENST00000365336 107 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.25□□□□□ -1.57
SF3A1Q15459 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SF3A1Q15459 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SF3A1Q15459 HDGFP1-201ENST00000405943 252 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.25□□□□□ -1.57
SF3A1Q15459 BX510359.2-201ENST00000417920 305 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.25□□□□□ -1.57
SF3A1Q15459 ISCA1P1-201ENST00000426679 387 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 MTATP6P4-201ENST00000427725 675 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 MTND3P21-201ENST00000433774 331 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 GPR143P-201ENST00000434155 205 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AC016831.4-201ENST00000438302 307 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AC016696.1-201ENST00000446949 318 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AC132479.1-201ENST00000449160 144 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AC006480.1-201ENST00000449887 378 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.25□□□□□ -1.57
SF3A1Q15459 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.25□□□□□ -1.57
SF3A1Q15459 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.25□□□□□ -1.57
SF3A1Q15459 AC093899.1-201ENST00000457984 376 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.25□□□□□ -1.57
SF3A1Q15459 SCARNA10-201ENST00000459255 330 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AC126182.1-201ENST00000478134 357 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.25□□□□□ -1.57
SF3A1Q15459 RN7SL817P-201ENST00000480777 288 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 GMPSP1-201ENST00000514075 579 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.25□□□□□ -1.57
SF3A1Q15459 RNU7-51P-201ENST00000516560 62 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AP004242.1-201ENST00000533701 349 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.25□□□□□ -1.57
SF3A1Q15459 ZNF519P2-201ENST00000557032 169 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 MIR4293-201ENST00000584305 78 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 Z84480.1-201ENST00000605131 311 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AL031666.3-201ENST00000609320 1006 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.25□□□□□ -1.57
SF3A1Q15459 SNHG22-203ENST00000617833 660 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SF3A1Q15459 AC091905.2-201ENST00000623143 306 ntBASIC5.25□□□□□ -1.57
SF3A1Q15459 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.25□□□□□ -1.57
SF3A1Q15459 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.25□□□□□ -1.57
SF3A1Q15459 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.25□□□□□ -1.57
SF3A1Q15459 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SF3A1Q15459 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SF3A1Q15459 AC010928.1-201ENST00000592477 1447 ntBASIC5.24□□□□□ -1.57
SF3A1Q15459 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SF3A1Q15459 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SF3A1Q15459 AL590240.1-201ENST00000334118 313 ntBASIC5.24□□□□□ -1.57
SF3A1Q15459 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SF3A1Q15459 RNA5SP372-201ENST00000390836 115 ntBASIC5.24□□□□□ -1.57
SF3A1Q15459 MTCO3P40-201ENST00000392516 676 ntBASIC5.24□□□□□ -1.57
SF3A1Q15459 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SF3A1Q15459 RPL17P50-201ENST00000396131 546 ntBASIC5.24□□□□□ -1.57
SF3A1Q15459 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SF3A1Q15459 AL136372.1-201ENST00000403060 228 ntBASIC5.24□□□□□ -1.57
SF3A1Q15459 TXNP7-201ENST00000406296 293 ntBASIC5.24□□□□□ -1.57
SF3A1Q15459 AL807761.1-201ENST00000417622 171 ntBASIC5.24□□□□□ -1.57
SF3A1Q15459 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.24□□□□□ -1.57
SF3A1Q15459 AC092017.2-201ENST00000427600 362 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms