Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX4Q06945 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SOX4Q06945 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SOX4Q06945 SAMMSON-226ENST00000642089 1582 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX4Q06945 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX4Q06945 RNU6-179P-201ENST00000363350 107 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 RNU6-379P-201ENST00000363813 104 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 SNORD116-11-201ENST00000383882 92 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 SNORA75B-201ENST00000384053 137 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 EIF4E2P1-201ENST00000393781 255 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 CYB5AP4-201ENST00000396692 399 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 ADAM24P-201ENST00000398655 2101 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AL359643.1-201ENST00000404109 423 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 RPL37P18-201ENST00000411602 243 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 POLHP1-201ENST00000411806 470 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 HMGN1P24-201ENST00000412282 298 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 GSTM3P2-201ENST00000412746 530 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX4Q06945 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.34□□□□□ -1.55
SOX4Q06945 RAC1P6-201ENST00000423911 575 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 NRBF2P3-201ENST00000432731 865 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AC128713.1-201ENST00000471495 306 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX4Q06945 COX6B1P2-201ENST00000489624 230 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.34□□□□□ -1.55
SOX4Q06945 AC097473.1-201ENST00000508142 408 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 RPS27AP18-201ENST00000515536 459 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 RNU6-635P-201ENST00000516651 102 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AC009812.2-201ENST00000517657 457 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.34□□□□□ -1.55
SOX4Q06945 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.34□□□□□ -1.55
SOX4Q06945 AP000859.1-201ENST00000525536 307 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.34□□□□□ -1.55
SOX4Q06945 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.34□□□□□ -1.55
SOX4Q06945 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.34□□□□□ -1.55
SOX4Q06945 BNIP3P16-201ENST00000589779 534 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 PRR13P7-201ENST00000605538 430 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AL008729.2-201ENST00000606393 473 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX4Q06945 MIR6748-201ENST00000610433 71 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AC006157.1-201ENST00000611750 366 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AP001486.3-201ENST00000615334 372 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 MIR7703-201ENST00000620784 77 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.34□□□□□ -1.55
SOX4Q06945 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX4Q06945 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX4Q06945 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX4Q06945 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX4Q06945 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.34□□□□□ -1.56
SOX4Q06945 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
SOX4Q06945 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SOX4Q06945 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
SOX4Q06945 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
SOX4Q06945 AC004817.4-201ENST00000602396 3625 ntBASIC5.34□□□□□ -1.56
SOX4Q06945 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.34□□□□□ -1.56
SOX4Q06945 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SOX4Q06945 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SOX4Q06945 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX4Q06945 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX4Q06945 RBPJP2-201ENST00000618187 1444 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SOX4Q06945 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.33□□□□□ -1.56
SOX4Q06945 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX4Q06945 Y_RNA.252-201ENST00000364556 101 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 Y_RNA.463-201ENST00000384271 102 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 AL360182.1-201ENST00000397433 468 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.33□□□□□ -1.56
SOX4Q06945 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX4Q06945 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX4Q06945 TRBV1-201ENST00000476502 284 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX4Q06945 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX4Q06945 AC097486.1-201ENST00000515331 210 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 Y_RNA.661-201ENST00000516003 99 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 RNU6-347P-201ENST00000516658 105 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX4Q06945 AC023442.1-201ENST00000531247 422 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX4Q06945 NDUFB4P11-201ENST00000560510 395 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.33□□□□□ -1.56
SOX4Q06945 PLCE1P1-201ENST00000622094 305 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.33□□□□□ -1.56
SOX4Q06945 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.33□□□□□ -1.56
SOX4Q06945 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX4Q06945 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX4Q06945 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SOX4Q06945 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX4Q06945 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX4Q06945 KPNA2P1-201ENST00000458289 1591 ntBASIC5.33□□□□□ -1.56
SOX4Q06945 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SOX4Q06945 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX4Q06945 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SOX4Q06945 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SOX4Q06945 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SOX4Q06945 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.32□□□□□ -1.56
SOX4Q06945 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX4Q06945 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms