Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC135776.4-201ENST00000624300 1904 ntBASIC1.23□□□□□ -2.21
RPL39P62891 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RPL39P62891 U3.26-201ENST00000391236 204 ntBASIC1.23□□□□□ -2.21
RPL39P62891 CYCSP45-201ENST00000402289 315 ntBASIC1.23□□□□□ -2.21
RPL39P62891 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL39P62891 AC092447.6-201ENST00000414578 210 ntBASIC1.23□□□□□ -2.21
RPL39P62891 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.23□□□□□ -2.21
RPL39P62891 AC096638.1-201ENST00000444678 216 ntBASIC1.23□□□□□ -2.21
RPL39P62891 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL39P62891 OR52A4P-203ENST00000498233 1014 ntBASIC1.23□□□□□ -2.21
RPL39P62891 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL39P62891 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL39P62891 HIGD1AP3-201ENST00000515857 278 ntBASIC1.23□□□□□ -2.21
RPL39P62891 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
RPL39P62891 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.23□□□□□ -2.21
RPL39P62891 AC074029.1-201ENST00000552531 1044 ntBASIC1.23□□□□□ -2.21
RPL39P62891 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL39P62891 AC090751.1-201ENST00000566966 267 ntBASIC1.23□□□□□ -2.21
RPL39P62891 MTCO1P40-201ENST00000574371 625 ntBASIC1.23□□□□□ -2.21
RPL39P62891 MIR1273D-201ENST00000577266 86 ntBASIC1.23□□□□□ -2.21
RPL39P62891 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL39P62891 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL39P62891 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.23□□□□□ -2.21
RPL39P62891 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.23□□□□□ -2.21
RPL39P62891 AL160281.1-201ENST00000605307 311 ntBASIC1.23□□□□□ -2.21
RPL39P62891 AC106028.5-201ENST00000610332 395 ntBASIC1.23□□□□□ -2.21
RPL39P62891 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
RPL39P62891 AL359715.4-201ENST00000606629 1436 ntBASIC1.23□□□□□ -2.21
RPL39P62891 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
RPL39P62891 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RPL39P62891 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RPL39P62891 AC009487.4-201ENST00000624969 3585 ntBASIC1.22□□□□□ -2.21
RPL39P62891 USP44-208ENST00000552440 1818 ntTSL 5 BASIC1.22□□□□□ -2.21
RPL39P62891 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.22□□□□□ -2.21
RPL39P62891 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
RPL39P62891 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
RPL39P62891 Z92545.1-201ENST00000411782 234 ntBASIC1.22□□□□□ -2.21
RPL39P62891 RPL23AP39-201ENST00000415533 405 ntBASIC1.22□□□□□ -2.21
RPL39P62891 ZNF90P2-204ENST00000419323 1075 ntBASIC1.22□□□□□ -2.21
RPL39P62891 AL445685.2-201ENST00000422551 342 ntBASIC1.22□□□□□ -2.21
RPL39P62891 AC010881.1-201ENST00000433830 235 ntBASIC1.22□□□□□ -2.21
RPL39P62891 AC234775.1-201ENST00000454247 670 ntBASIC1.22□□□□□ -2.21
RPL39P62891 AC104849.1-201ENST00000462623 405 ntBASIC1.22□□□□□ -2.21
RPL39P62891 RPS29P11-201ENST00000496507 171 ntBASIC1.22□□□□□ -2.21
RPL39P62891 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.22□□□□□ -2.21
RPL39P62891 AC103783.1-201ENST00000520506 373 ntBASIC1.22□□□□□ -2.21
RPL39P62891 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL39P62891 AC104581.2-201ENST00000572227 430 ntBASIC1.22□□□□□ -2.21
RPL39P62891 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL39P62891 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.22□□□□□ -2.21
RPL39P62891 AL031601.2-202ENST00000622650 282 ntBASIC1.22□□□□□ -2.21
RPL39P62891 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.22□□□□□ -2.21
RPL39P62891 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RPL39P62891 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.21□□□□□ -2.22
RPL39P62891 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
RPL39P62891 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.21□□□□□ -2.22
RPL39P62891 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.21□□□□□ -2.22
RPL39P62891 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RPL39P62891 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.21□□□□□ -2.22
RPL39P62891 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RPL39P62891 RPL31P2-201ENST00000413849 377 ntBASIC1.21□□□□□ -2.22
RPL39P62891 AL357078.2-201ENST00000416486 427 ntBASIC1.21□□□□□ -2.22
RPL39P62891 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.21□□□□□ -2.22
RPL39P62891 AL645568.3-201ENST00000433683 316 ntBASIC1.21□□□□□ -2.22
RPL39P62891 RPL23AP83-201ENST00000434984 473 ntBASIC1.21□□□□□ -2.22
RPL39P62891 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
RPL39P62891 AC104687.1-201ENST00000485829 412 ntBASIC1.21□□□□□ -2.22
RPL39P62891 AC079203.1-201ENST00000487972 404 ntBASIC1.21□□□□□ -2.22
RPL39P62891 RPL38P4-201ENST00000502376 214 ntBASIC1.21□□□□□ -2.22
RPL39P62891 AC093281.2-201ENST00000510153 597 ntBASIC1.21□□□□□ -2.22
RPL39P62891 AC108043.1-201ENST00000512696 574 ntBASIC1.21□□□□□ -2.22
RPL39P62891 RN7SKP31-201ENST00000516354 278 ntBASIC1.21□□□□□ -2.22
RPL39P62891 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.21□□□□□ -2.22
RPL39P62891 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.21□□□□□ -2.22
RPL39P62891 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC1.21□□□□□ -2.22
RPL39P62891 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.21□□□□□ -2.22
RPL39P62891 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RPL39P62891 AC010680.4-201ENST00000605334 543 ntBASIC1.21□□□□□ -2.22
RPL39P62891 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RPL39P62891 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.21□□□□□ -2.22
RPL39P62891 AL096803.3-201ENST00000609032 532 ntBASIC1.21□□□□□ -2.22
RPL39P62891 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.21□□□□□ -2.22
RPL39P62891 AC103798.2-201ENST00000624292 632 ntBASIC1.21□□□□□ -2.22
RPL39P62891 AC116618.1-201ENST00000634617 774 ntBASIC1.21□□□□□ -2.22
RPL39P62891 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC1.21□□□□□ -2.22
RPL39P62891 ZNF734P-201ENST00000419494 1534 ntBASIC1.2□□□□□ -2.22
RPL39P62891 AL136520.1-201ENST00000600311 1322 ntBASIC1.2□□□□□ -2.22
RPL39P62891 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RPL39P62891 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.2□□□□□ -2.22
RPL39P62891 SET-203ENST00000372688 801 ntTSL 2 BASIC1.2□□□□□ -2.22
RPL39P62891 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RPL39P62891 AL355497.1-201ENST00000406262 551 ntBASIC1.2□□□□□ -2.22
RPL39P62891 AL135786.1-201ENST00000415892 214 ntBASIC1.2□□□□□ -2.22
RPL39P62891 AC008173.1-201ENST00000418901 264 ntBASIC1.2□□□□□ -2.22
RPL39P62891 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RPL39P62891 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.2□□□□□ -2.22
RPL39P62891 HMGN2P21-201ENST00000447764 270 ntBASIC1.2□□□□□ -2.22
RPL39P62891 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.2□□□□□ -2.22
RPL39P62891 FABP5P13-201ENST00000452144 328 ntBASIC1.2□□□□□ -2.22
RPL39P62891 AC239798.3-201ENST00000454459 408 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms