Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC022493.1-201ENST00000492984 337 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 CBX3P3-201ENST00000508108 532 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.9□□□□□ -2.11
CKS1BP61024 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.9□□□□□ -2.11
CKS1BP61024 AC009812.2-201ENST00000517657 457 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.9□□□□□ -2.11
CKS1BP61024 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC1.9□□□□□ -2.11
CKS1BP61024 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.9□□□□□ -2.11
CKS1BP61024 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.9□□□□□ -2.11
CKS1BP61024 H3F3AP1-201ENST00000559984 334 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.9□□□□□ -2.11
CKS1BP61024 MIR5004-201ENST00000579078 107 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 AC008277.2-201ENST00000605196 797 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 AC013468.1-201ENST00000608680 598 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 AL031601.2-202ENST00000622650 282 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CKS1BP61024 AC034229.5-201ENST00000624258 185 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 AL109809.4-201ENST00000603520 2185 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CKS1BP61024 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.9□□□□□ -2.11
CKS1BP61024 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.9□□□□□ -2.11
CKS1BP61024 AL022578.1-201ENST00000439330 1433 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 AL035425.3-201ENST00000564206 4996 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.9□□□□□ -2.11
CKS1BP61024 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CKS1BP61024 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CKS1BP61024 AL049780.3-201ENST00000624612 1583 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 MTND4P35-201ENST00000604257 1375 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.89□□□□□ -2.11
CKS1BP61024 SNORA38-201ENST00000363946 132 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CKS1BP61024 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC1.89□□□□□ -2.11
CKS1BP61024 AC069157.1-201ENST00000421749 137 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 WARS2P1-201ENST00000429678 537 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AL159987.2-201ENST00000432754 307 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.89□□□□□ -2.11
CKS1BP61024 Z75741.1-201ENST00000446793 314 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.89□□□□□ -2.11
CKS1BP61024 BX248409.1-201ENST00000455497 255 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 BTF3P5-201ENST00000457252 467 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AC087588.1-201ENST00000462203 316 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AC097493.1-201ENST00000463958 372 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.89□□□□□ -2.11
CKS1BP61024 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.89□□□□□ -2.11
CKS1BP61024 AC079804.2-201ENST00000490376 200 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AC090255.1-201ENST00000495779 349 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 WBP1LP4-201ENST00000505043 344 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.89□□□□□ -2.11
CKS1BP61024 MIR514B-201ENST00000516774 80 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC1.89□□□□□ -2.11
CKS1BP61024 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.89□□□□□ -2.11
CKS1BP61024 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.89□□□□□ -2.11
CKS1BP61024 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.89□□□□□ -2.11
CKS1BP61024 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.89□□□□□ -2.11
CKS1BP61024 MED28P6-201ENST00000558776 231 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.89□□□□□ -2.11
CKS1BP61024 AGGF1P5-201ENST00000567900 919 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.89□□□□□ -2.11
CKS1BP61024 AP005137.2-201ENST00000609238 400 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 AC079395.3-201ENST00000615161 484 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.89□□□□□ -2.11
CKS1BP61024 AC027309.3-201ENST00000623419 351 ntBASIC1.89□□□□□ -2.11
CKS1BP61024 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
CKS1BP61024 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CKS1BP61024 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CKS1BP61024 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CKS1BP61024 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CKS1BP61024 SNORA63.1-201ENST00000362493 131 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 RNA5SP72-201ENST00000364442 117 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CKS1BP61024 AP002784.2-201ENST00000397300 549 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 AL353692.2-201ENST00000407054 335 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 MIR1303-201ENST00000408625 86 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 RNU6-712P-201ENST00000410558 100 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 TATDN1P1-201ENST00000414123 891 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 RPS3AP9-201ENST00000417027 792 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.88□□□□□ -2.11
CKS1BP61024 AL358075.3-201ENST00000426289 226 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 UBE2FP3-201ENST00000436366 524 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 Z99127.2-201ENST00000441426 334 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 GPM6BP3-201ENST00000442797 145 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CKS1BP61024 RPL23AP15-201ENST00000450202 459 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 NIPA2P5-201ENST00000452282 464 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.88□□□□□ -2.11
CKS1BP61024 RPL23AP45-201ENST00000476406 468 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 AC083906.5-201ENST00000503722 328 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.88□□□□□ -2.11
CKS1BP61024 AC104057.1-201ENST00000515547 497 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC1.88□□□□□ -2.11
CKS1BP61024 AC118942.1-201ENST00000529674 1035 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CKS1BP61024 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.88□□□□□ -2.11
CKS1BP61024 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC1.88□□□□□ -2.11
CKS1BP61024 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.88□□□□□ -2.11
CKS1BP61024 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC1.88□□□□□ -2.11
CKS1BP61024 AL138976.2-201ENST00000563989 694 ntBASIC1.88□□□□□ -2.11
CKS1BP61024 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms