Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.97□□□□□ -1.93
PKNOX1P55347 MTCO3P24-201ENST00000572729 782 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 MAGOH2P-202ENST00000584384 429 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.97□□□□□ -1.93
PKNOX1P55347 AC083760.1-201ENST00000589621 670 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 AC073387.2-201ENST00000604797 784 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 AC112220.2-201ENST00000605513 533 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 AC018645.2-201ENST00000609151 472 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.97□□□□□ -1.93
PKNOX1P55347 AL360181.4-201ENST00000621752 134 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.97□□□□□ -1.93
PKNOX1P55347 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PKNOX1P55347 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
PKNOX1P55347 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PKNOX1P55347 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
PKNOX1P55347 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.96□□□□□ -1.94
PKNOX1P55347 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.96□□□□□ -1.94
PKNOX1P55347 AL035425.3-201ENST00000564206 4996 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PKNOX1P55347 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PKNOX1P55347 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PKNOX1P55347 MIR134-201ENST00000385258 73 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AL450338.1-201ENST00000407987 512 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.96□□□□□ -1.94
PKNOX1P55347 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.96□□□□□ -1.94
PKNOX1P55347 AC099677.1-201ENST00000420575 175 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.96□□□□□ -1.94
PKNOX1P55347 NIPA2P1-201ENST00000426223 976 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.96□□□□□ -1.94
PKNOX1P55347 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.96□□□□□ -1.94
PKNOX1P55347 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 GTF2IP3-201ENST00000433887 494 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 SETP8-201ENST00000435341 628 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.96□□□□□ -1.94
PKNOX1P55347 Z75741.1-201ENST00000446793 314 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AC016696.1-201ENST00000446949 318 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PKNOX1P55347 OR4G11P-201ENST00000492842 939 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PKNOX1P55347 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.96□□□□□ -1.94
PKNOX1P55347 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.96□□□□□ -1.94
PKNOX1P55347 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.96□□□□□ -1.94
PKNOX1P55347 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.96□□□□□ -1.94
PKNOX1P55347 AC125611.1-201ENST00000549563 229 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.96□□□□□ -1.94
PKNOX1P55347 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.96□□□□□ -1.94
PKNOX1P55347 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.96□□□□□ -1.94
PKNOX1P55347 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.96□□□□□ -1.94
PKNOX1P55347 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PKNOX1P55347 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.96□□□□□ -1.94
PKNOX1P55347 AC034105.4-201ENST00000568304 277 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.96□□□□□ -1.94
PKNOX1P55347 AL020997.2-201ENST00000602607 184 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AL159169.3-201ENST00000608871 561 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AL110115.1-201ENST00000614396 364 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AL353748.2-201ENST00000622148 471 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AL049777.1-201ENST00000622740 518 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 AC018692.3-201ENST00000623929 123 ntBASIC2.96□□□□□ -1.94
PKNOX1P55347 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.96□□□□□ -1.94
PKNOX1P55347 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.96□□□□□ -1.94
PKNOX1P55347 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PKNOX1P55347 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PKNOX1P55347 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PKNOX1P55347 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
PKNOX1P55347 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PKNOX1P55347 MTCO1P12-201ENST00000414273 1543 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PKNOX1P55347 snoZ40.1-201ENST00000364540 72 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 RNU6-224P-201ENST00000384055 107 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 MIR449B-201ENST00000384995 97 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 MIR506-201ENST00000384998 124 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 U3.19-201ENST00000390893 196 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 AL591034.1-201ENST00000407447 340 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 RPL21P32-201ENST00000419877 477 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.95□□□□□ -1.94
PKNOX1P55347 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PKNOX1P55347 AC093151.1-201ENST00000427711 313 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.95□□□□□ -1.94
PKNOX1P55347 AL050321.1-201ENST00000432363 400 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 AC006028.1-201ENST00000438379 402 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 snoU109.4-201ENST00000458953 143 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 AC020898.1-201ENST00000474167 787 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 AC010460.2-201ENST00000509054 677 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.95□□□□□ -1.94
PKNOX1P55347 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.95□□□□□ -1.94
PKNOX1P55347 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
PKNOX1P55347 AC239860.2-201ENST00000525886 270 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.95□□□□□ -1.94
PKNOX1P55347 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.95□□□□□ -1.94
PKNOX1P55347 GTF2IP8-201ENST00000560687 584 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.95□□□□□ -1.94
PKNOX1P55347 AC010653.1-201ENST00000571108 881 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.95□□□□□ -1.94
PKNOX1P55347 AL158163.2-201ENST00000619110 700 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.95□□□□□ -1.94
PKNOX1P55347 AC015967.1-201ENST00000619893 476 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 AC123767.1-202ENST00000620407 817 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 AC073348.1-201ENST00000623002 331 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms