Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH4P55283 RPL35AP12-201ENST00000425362 338 ntBASIC3.09□□□□□ -1.91
CDH4P55283 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
CDH4P55283 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH4P55283 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH4P55283 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH4P55283 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH4P55283 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH4P55283 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH4P55283 AC117440.1-201ENST00000474107 571 ntBASIC3.09□□□□□ -1.91
CDH4P55283 DYNLL1P6-201ENST00000503440 264 ntBASIC3.09□□□□□ -1.91
CDH4P55283 PRELID3BP6-201ENST00000503839 571 ntBASIC3.09□□□□□ -1.91
CDH4P55283 KCTD9P5-201ENST00000504141 1170 ntBASIC3.09□□□□□ -1.91
CDH4P55283 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH4P55283 RNU5A-7P-201ENST00000515979 116 ntBASIC3.09□□□□□ -1.91
CDH4P55283 RN7SKP282-201ENST00000516824 299 ntBASIC3.09□□□□□ -1.91
CDH4P55283 AC023632.1-201ENST00000518463 375 ntBASIC3.09□□□□□ -1.91
CDH4P55283 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH4P55283 ERHP1-201ENST00000523006 310 ntBASIC3.09□□□□□ -1.91
CDH4P55283 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.09□□□□□ -1.91
CDH4P55283 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.09□□□□□ -1.91
CDH4P55283 AC018630.1-201ENST00000541376 925 ntBASIC3.09□□□□□ -1.91
CDH4P55283 AC090502.2-201ENST00000549267 280 ntBASIC3.09□□□□□ -1.91
CDH4P55283 AL391156.1-201ENST00000554965 554 ntBASIC3.09□□□□□ -1.91
CDH4P55283 AL136520.1-202ENST00000555494 763 ntBASIC3.09□□□□□ -1.91
CDH4P55283 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH4P55283 AC044913.1-201ENST00000557200 430 ntBASIC3.09□□□□□ -1.91
CDH4P55283 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH4P55283 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH4P55283 AC026634.1-201ENST00000634369 198 ntBASIC3.09□□□□□ -1.91
CDH4P55283 AC139713.2-210ENST00000641741 992 ntBASIC3.09□□□□□ -1.91
CDH4P55283 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDH4P55283 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CDH4P55283 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDH4P55283 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDH4P55283 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH4P55283 MTND5P7-201ENST00000413558 1798 ntBASIC3.08□□□□□ -1.92
CDH4P55283 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CDH4P55283 RNU6-657P-201ENST00000383904 107 ntBASIC3.08□□□□□ -1.92
CDH4P55283 CYCSP45-201ENST00000402289 315 ntBASIC3.08□□□□□ -1.92
CDH4P55283 AL031121.1-201ENST00000406553 254 ntBASIC3.08□□□□□ -1.92
CDH4P55283 RNU2-28P-201ENST00000410457 189 ntBASIC3.08□□□□□ -1.92
CDH4P55283 AC019070.1-201ENST00000415008 1024 ntBASIC3.08□□□□□ -1.92
CDH4P55283 MRPL50P2-201ENST00000416821 482 ntBASIC3.08□□□□□ -1.92
CDH4P55283 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH4P55283 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH4P55283 SNRPEP4-201ENST00000435815 279 ntBASIC3.08□□□□□ -1.92
CDH4P55283 FTH1P1-201ENST00000437933 532 ntBASIC3.08□□□□□ -1.92
CDH4P55283 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH4P55283 TRIM60P18-201ENST00000441518 828 ntBASIC3.08□□□□□ -1.92
CDH4P55283 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.08□□□□□ -1.92
CDH4P55283 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH4P55283 AC140076.1-201ENST00000449897 361 ntBASIC3.08□□□□□ -1.92
CDH4P55283 AL445669.2-201ENST00000454425 421 ntBASIC3.08□□□□□ -1.92
CDH4P55283 AC013828.1-201ENST00000481845 158 ntBASIC3.08□□□□□ -1.92
CDH4P55283 AC011825.1-201ENST00000484967 388 ntBASIC3.08□□□□□ -1.92
CDH4P55283 SNORA31.26-201ENST00000517250 137 ntBASIC3.08□□□□□ -1.92
CDH4P55283 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.08□□□□□ -1.92
CDH4P55283 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH4P55283 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH4P55283 MIR4666A-201ENST00000580160 79 ntBASIC3.08□□□□□ -1.92
CDH4P55283 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH4P55283 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH4P55283 AC106900.2-201ENST00000604994 317 ntBASIC3.08□□□□□ -1.92
CDH4P55283 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.08□□□□□ -1.92
CDH4P55283 AC106028.5-201ENST00000610332 395 ntBASIC3.08□□□□□ -1.92
CDH4P55283 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH4P55283 CYCSP41-201ENST00000616920 296 ntBASIC3.08□□□□□ -1.92
CDH4P55283 AC002076.2-201ENST00000617362 122 ntBASIC3.08□□□□□ -1.92
CDH4P55283 CYP3A51P-201ENST00000633513 256 ntBASIC3.08□□□□□ -1.92
CDH4P55283 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH4P55283 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH4P55283 HMGB1P5-201ENST00000255320 642 ntBASIC3.07□□□□□ -1.92
CDH4P55283 GNG5P1-201ENST00000255500 204 ntBASIC3.07□□□□□ -1.92
CDH4P55283 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH4P55283 RNU6-492P-201ENST00000363035 104 ntBASIC3.07□□□□□ -1.92
CDH4P55283 RNU6-1066P-201ENST00000363573 105 ntBASIC3.07□□□□□ -1.92
CDH4P55283 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDH4P55283 MIR217-201ENST00000384817 110 ntBASIC3.07□□□□□ -1.92
CDH4P55283 AL035405.1-201ENST00000400795 710 ntBASIC3.07□□□□□ -1.92
CDH4P55283 RPL5P18-201ENST00000406671 891 ntBASIC3.07□□□□□ -1.92
CDH4P55283 RNU2-15P-201ENST00000410692 191 ntBASIC3.07□□□□□ -1.92
CDH4P55283 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH4P55283 AC233728.2-201ENST00000425348 757 ntBASIC3.07□□□□□ -1.92
CDH4P55283 RAC1P8-201ENST00000427086 527 ntBASIC3.07□□□□□ -1.92
CDH4P55283 Z93242.1-201ENST00000427102 353 ntBASIC3.07□□□□□ -1.92
CDH4P55283 OR2AS1P-201ENST00000427827 319 ntBASIC3.07□□□□□ -1.92
CDH4P55283 RPL21P40-201ENST00000428586 483 ntBASIC3.07□□□□□ -1.92
CDH4P55283 MTCYBP34-201ENST00000439552 670 ntBASIC3.07□□□□□ -1.92
CDH4P55283 AL645638.1-201ENST00000440519 361 ntBASIC3.07□□□□□ -1.92
CDH4P55283 NANOGNBP1-201ENST00000448444 480 ntBASIC3.07□□□□□ -1.92
CDH4P55283 COX6CP18-201ENST00000448769 222 ntBASIC3.07□□□□□ -1.92
CDH4P55283 AC112492.1-201ENST00000449607 712 ntBASIC3.07□□□□□ -1.92
CDH4P55283 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH4P55283 snoU109.4-201ENST00000458953 143 ntBASIC3.07□□□□□ -1.92
CDH4P55283 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH4P55283 AC114967.1-201ENST00000504890 259 ntBASIC3.07□□□□□ -1.92
CDH4P55283 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH4P55283 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH4P55283 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms