Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AP001521.1-201ENST00000609150 300 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 AL360219.1-201ENST00000610230 366 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 AC012531.5-201ENST00000611375 151 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 AL442067.2-201ENST00000614033 363 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK2P53671 AC073348.1-201ENST00000623002 331 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 MIR4278-201ENST00000636094 69 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 MIR1322-201ENST00000638013 71 ntBASIC3.45□□□□□ -1.86
LIMK2P53671 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIMK2P53671 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LIMK2P53671 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK2P53671 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMK2P53671 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMK2P53671 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LIMK2P53671 RNU5D-1-201ENST00000363299 116 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 RNU1-33P-201ENST00000364249 162 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LIMK2P53671 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMK2P53671 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK2P53671 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMK2P53671 FNDC3CP-201ENST00000420795 1155 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AC006548.1-201ENST00000427470 102 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK2P53671 AC127537.2-201ENST00000439258 465 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK2P53671 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK2P53671 ATG12P2-201ENST00000456830 416 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AC010468.1-201ENST00000461022 817 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 RPL23AP62-201ENST00000463396 453 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 RPL5P24-201ENST00000463742 885 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 RN7SL601P-201ENST00000471221 293 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AL049830.2-201ENST00000480072 201 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 BET1P1-201ENST00000482276 359 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AC108078.3-201ENST00000502633 489 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AC093767.1-201ENST00000504523 156 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.44□□□□□ -1.86
LIMK2P53671 FABP5P12-201ENST00000515543 389 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMK2P53671 MTCYBP41-201ENST00000528913 1123 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK2P53671 OR5D17P-201ENST00000531492 978 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK2P53671 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.44□□□□□ -1.86
LIMK2P53671 AC125611.1-201ENST00000549563 229 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMK2P53671 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK2P53671 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK2P53671 NCAPGP2-201ENST00000557911 754 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AL354943.1-201ENST00000572103 781 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 MIR5186-201ENST00000577504 120 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 MIR3200-201ENST00000580767 85 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
LIMK2P53671 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK2P53671 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK2P53671 AC131159.1-201ENST00000621854 213 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AP000676.3-201ENST00000623299 569 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 CR381572.1-201ENST00000625098 102 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK2P53671 MIR3974-201ENST00000637126 96 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK2P53671 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
LIMK2P53671 GDI2P1-201ENST00000429312 1336 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 AC107982.1-201ENST00000507171 1300 ntBASIC3.44□□□□□ -1.86
LIMK2P53671 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIMK2P53671 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIMK2P53671 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
LIMK2P53671 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIMK2P53671 RNU6-263P-201ENST00000363811 107 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 SNORD82-201ENST00000365530 70 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIMK2P53671 RNU6-413P-201ENST00000384115 107 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LIMK2P53671 RPL31P1-201ENST00000398116 372 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.43□□□□□ -1.86
LIMK2P53671 SKINT1L-201ENST00000401057 817 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 HSPE1P26-201ENST00000405341 275 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 RNU2-42P-201ENST00000410697 113 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 AL161449.1-201ENST00000414531 1199 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.43□□□□□ -1.86
LIMK2P53671 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.43□□□□□ -1.86
LIMK2P53671 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 ARF4P2-201ENST00000430209 526 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 COX7BP2-201ENST00000437976 242 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 AC008264.1-201ENST00000447612 367 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.43□□□□□ -1.86
LIMK2P53671 NECAP1P2-201ENST00000455668 727 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 RPL21P10-201ENST00000463521 490 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 RPL23AP14-201ENST00000468281 468 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 TMED11P-201ENST00000479478 690 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 RPS4XP22-201ENST00000480755 780 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 MRPS33P3-201ENST00000513456 322 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 RNU6-1129P-201ENST00000515964 104 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.43□□□□□ -1.86
LIMK2P53671 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.43□□□□□ -1.86
LIMK2P53671 AC087373.1-201ENST00000524920 491 ntBASIC3.43□□□□□ -1.86
LIMK2P53671 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms