Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TNFSF9P41273 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
TNFSF9P41273 SGO1P1-201ENST00000603525 1447 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TNFSF9P41273 AL136164.4-201ENST00000625013 2135 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AC130650.2-201ENST00000618736 2403 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TNFSF9P41273 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TNFSF9P41273 FTLP6-201ENST00000355274 422 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 EI24P2-201ENST00000397776 1076 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AL023807.1-201ENST00000407932 359 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 RNU4-65P-201ENST00000410473 140 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 RNA5SP80-201ENST00000410475 111 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 RNA5SP184-201ENST00000411071 108 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.93□□□□□ -1.94
TNFSF9P41273 AIMP1P1-201ENST00000418670 937 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.93□□□□□ -1.94
TNFSF9P41273 NUP35P1-201ENST00000422734 947 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.93□□□□□ -1.94
TNFSF9P41273 FAM204CP-201ENST00000424489 642 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.93□□□□□ -1.94
TNFSF9P41273 AL590762.3-201ENST00000436372 640 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFSF9P41273 GXYLT1P1-201ENST00000446657 490 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.93□□□□□ -1.94
TNFSF9P41273 AL109933.2-201ENST00000452651 260 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AC104308.1-201ENST00000454621 333 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.93□□□□□ -1.94
TNFSF9P41273 RN7SL432P-201ENST00000484057 298 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 MTND3P24-201ENST00000506306 329 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AC112518.2-201ENST00000508565 425 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.93□□□□□ -1.94
TNFSF9P41273 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFSF9P41273 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFSF9P41273 AP005205.1-201ENST00000563503 508 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 MTCO3P24-201ENST00000572729 782 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFSF9P41273 GAS5-AS1-201ENST00000602767 694 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.93□□□□□ -1.94
TNFSF9P41273 AC107294.3-201ENST00000609211 526 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TNFSF9P41273 AC068831.7-201ENST00000616954 363 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 ZNF826P-207ENST00000622273 1910 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 ZNF542P-204ENST00000482727 1305 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AC109315.1-201ENST00000584143 1347 ntBASIC2.93□□□□□ -1.94
TNFSF9P41273 AC010733.2-201ENST00000589496 5702 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.92□□□□□ -1.94
TNFSF9P41273 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TNFSF9P41273 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TNFSF9P41273 RNU6-301P-201ENST00000384277 107 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 MIR9-1-201ENST00000385198 89 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 MIR16-1-201ENST00000385271 89 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 RNU1-101P-201ENST00000391171 127 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 VN1R51P-201ENST00000411675 945 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 USP9YP19-201ENST00000412165 485 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF9P41273 AL606495.1-201ENST00000422100 813 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.92□□□□□ -1.94
TNFSF9P41273 AC244505.4-201ENST00000434905 287 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 SSXP5-201ENST00000443473 287 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF9P41273 AP000936.2-201ENST00000447151 681 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 RPL31P50-201ENST00000471002 296 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 HMGN2P13-201ENST00000476476 274 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF9P41273 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF9P41273 MTND4LP22-201ENST00000508209 276 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 SNORA31.21-201ENST00000517180 77 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 AP003102.1-201ENST00000525638 661 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFSF9P41273 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.92□□□□□ -1.94
TNFSF9P41273 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF9P41273 AC010653.1-201ENST00000571108 881 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 MIR3605-201ENST00000583214 100 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF9P41273 AC092474.3-201ENST00000603022 568 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 AC016877.3-201ENST00000606778 504 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TNFSF9P41273 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFSF9P41273 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TNFSF9P41273 ASNSP3-201ENST00000451989 1306 ntBASIC2.92□□□□□ -1.94
TNFSF9P41273 AC092326.2-201ENST00000624772 1561 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TNFSF9P41273 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AC008264.2-201ENST00000610193 3731 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
TNFSF9P41273 MTND5P27-201ENST00000428871 1720 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 RNA5SP126-201ENST00000365092 109 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 SNORD82-201ENST00000365530 70 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 RNU6-730P-201ENST00000383954 104 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 MIR34A-201ENST00000385130 110 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AP002784.2-201ENST00000397300 549 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AL121978.1-201ENST00000402778 359 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AL354719.1-201ENST00000406535 843 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 RNU6-712P-201ENST00000410558 100 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFSF9P41273 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFSF9P41273 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms