Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 YPEL5P3-201ENST00000547227 352 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AL121603.1-201ENST00000553815 142 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.56□□□□□ -1.84
APOBEC1P41238 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AC005771.1-201ENST00000585581 349 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AC005255.1-201ENST00000593748 216 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AL359999.1-201ENST00000604513 294 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBEC1P41238 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AC010678.1-201ENST00000614118 713 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AC108479.2-201ENST00000617314 601 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 AC092656.1-203ENST00000624134 423 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBEC1P41238 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
APOBEC1P41238 AC092125.1-201ENST00000562568 1995 ntBASIC3.56□□□□□ -1.84
APOBEC1P41238 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOBEC1P41238 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.55□□□□□ -1.84
APOBEC1P41238 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.55□□□□□ -1.84
APOBEC1P41238 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBEC1P41238 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBEC1P41238 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBEC1P41238 BDP1P-201ENST00000582658 1990 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 FRG1BP-201ENST00000278882 761 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBEC1P41238 AL137014.1-201ENST00000420490 1226 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AC006366.1-201ENST00000422002 759 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.55□□□□□ -1.84
APOBEC1P41238 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBEC1P41238 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.55□□□□□ -1.84
APOBEC1P41238 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBEC1P41238 TBCAP1-201ENST00000436520 327 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBEC1P41238 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBEC1P41238 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBEC1P41238 RANP8-201ENST00000444720 713 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBEC1P41238 MTND1P9-201ENST00000453775 944 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AC104308.1-201ENST00000454621 333 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBEC1P41238 CFTRP1-201ENST00000456646 183 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 HMGB3P30-201ENST00000457863 606 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 TPTE2P5-203ENST00000458118 728 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBEC1P41238 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOBEC1P41238 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.55□□□□□ -1.84
APOBEC1P41238 Y_RNA.655-201ENST00000515919 96 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBEC1P41238 AC087369.1-201ENST00000520775 996 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AP003497.1-201ENST00000528472 562 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AC022878.1-201ENST00000530684 149 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.55□□□□□ -1.84
APOBEC1P41238 AP002453.2-201ENST00000533503 320 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.55□□□□□ -1.84
APOBEC1P41238 RFPL1S-203ENST00000539579 330 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AC126177.3-201ENST00000551839 688 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBEC1P41238 AC007224.1-201ENST00000564410 144 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.55□□□□□ -1.84
APOBEC1P41238 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBEC1P41238 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.55□□□□□ -1.84
APOBEC1P41238 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.55□□□□□ -1.84
APOBEC1P41238 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBEC1P41238 MIR3611-201ENST00000584484 83 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBEC1P41238 AC020914.4-201ENST00000597690 277 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 BNIP3P8-201ENST00000597863 560 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AC112191.3-201ENST00000604371 277 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AL592436.1-201ENST00000605135 558 ntBASIC3.55□□□□□ -1.84
APOBEC1P41238 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBEC1P41238 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBEC1P41238 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
APOBEC1P41238 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
APOBEC1P41238 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBEC1P41238 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.54□□□□□ -1.84
APOBEC1P41238 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.54□□□□□ -1.84
APOBEC1P41238 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBEC1P41238 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APOBEC1P41238 FAM35DP-201ENST00000323387 2712 ntBASIC3.54□□□□□ -1.84
APOBEC1P41238 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.54□□□□□ -1.84
APOBEC1P41238 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
APOBEC1P41238 SNORD115.1-201ENST00000391109 76 ntBASIC3.54□□□□□ -1.84
APOBEC1P41238 RPS20P2-201ENST00000402520 389 ntBASIC3.54□□□□□ -1.84
APOBEC1P41238 RNA5SP239-201ENST00000410218 129 ntBASIC3.54□□□□□ -1.84
APOBEC1P41238 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.54□□□□□ -1.84
APOBEC1P41238 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.54□□□□□ -1.84
APOBEC1P41238 AC099677.1-201ENST00000420575 175 ntBASIC3.54□□□□□ -1.84
APOBEC1P41238 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.54□□□□□ -1.84
APOBEC1P41238 AC092832.1-201ENST00000422934 400 ntBASIC3.54□□□□□ -1.84
APOBEC1P41238 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.54□□□□□ -1.84
APOBEC1P41238 AL117339.2-201ENST00000430475 180 ntBASIC3.54□□□□□ -1.84
APOBEC1P41238 OR4C10P-201ENST00000434991 931 ntBASIC3.54□□□□□ -1.84
APOBEC1P41238 USP9YP7-201ENST00000436723 430 ntBASIC3.54□□□□□ -1.84
APOBEC1P41238 USP9YP32-201ENST00000452432 430 ntBASIC3.54□□□□□ -1.84
APOBEC1P41238 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 218.3 ms