Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.22□□□□□ -1.73
CIITAP33076 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.22□□□□□ -1.73
CIITAP33076 AC079089.3-201ENST00000603094 673 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AC073648.5-201ENST00000603502 305 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AC015871.2-201ENST00000603605 948 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AC068276.1-201ENST00000605793 379 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.22□□□□□ -1.73
CIITAP33076 AC243773.3-201ENST00000613270 256 ntBASIC4.22□□□□□ -1.73
CIITAP33076 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.22□□□□□ -1.73
CIITAP33076 AL359740.1-201ENST00000624340 592 ntBASIC4.22□□□□□ -1.73
CIITAP33076 AC025048.6-202ENST00000627667 438 ntBASIC4.22□□□□□ -1.73
CIITAP33076 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CIITAP33076 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CIITAP33076 AL031985.3-201ENST00000565390 2449 ntBASIC4.22□□□□□ -1.73
CIITAP33076 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.22□□□□□ -1.73
CIITAP33076 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CIITAP33076 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.22□□□□□ -1.73
CIITAP33076 GDI2P1-201ENST00000429312 1336 ntBASIC4.21□□□□□ -1.73
CIITAP33076 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CIITAP33076 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CIITAP33076 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CIITAP33076 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CIITAP33076 Y_RNA.3-201ENST00000362331 103 ntBASIC4.21□□□□□ -1.74
CIITAP33076 RNU6-501P-201ENST00000364072 100 ntBASIC4.21□□□□□ -1.74
CIITAP33076 RNU4-91P-201ENST00000364778 135 ntBASIC4.21□□□□□ -1.74
CIITAP33076 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.21□□□□□ -1.74
CIITAP33076 Y_RNA.517-201ENST00000384551 106 ntBASIC4.21□□□□□ -1.74
CIITAP33076 MIR649-201ENST00000384843 97 ntBASIC4.21□□□□□ -1.74
CIITAP33076 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CIITAP33076 RPL21P17-201ENST00000397467 475 ntBASIC4.21□□□□□ -1.74
CIITAP33076 SNRPEP2-201ENST00000397592 279 ntBASIC4.21□□□□□ -1.74
CIITAP33076 RPS7P13-201ENST00000413955 498 ntBASIC4.21□□□□□ -1.74
CIITAP33076 SYF2P2-201ENST00000417620 583 ntBASIC4.21□□□□□ -1.74
CIITAP33076 AC092832.1-201ENST00000422934 400 ntBASIC4.21□□□□□ -1.74
CIITAP33076 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.21□□□□□ -1.74
CIITAP33076 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.21□□□□□ -1.74
CIITAP33076 BMI1P1-201ENST00000445879 941 ntBASIC4.21□□□□□ -1.74
CIITAP33076 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.21□□□□□ -1.74
CIITAP33076 VN1R10P-201ENST00000447106 875 ntBASIC4.21□□□□□ -1.74
CIITAP33076 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.21□□□□□ -1.74
CIITAP33076 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.21□□□□□ -1.74
CIITAP33076 HMGB3P30-201ENST00000457863 606 ntBASIC4.21□□□□□ -1.74
CIITAP33076 AC092757.1-201ENST00000467293 467 ntBASIC4.21□□□□□ -1.74
CIITAP33076 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.21□□□□□ -1.74
CIITAP33076 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.21□□□□□ -1.74
CIITAP33076 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.21□□□□□ -1.74
CIITAP33076 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.21□□□□□ -1.74
CIITAP33076 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CIITAP33076 PAICSP4-201ENST00000517543 1253 ntBASIC4.21□□□□□ -1.74
CIITAP33076 IGLVIV-53-201ENST00000520107 367 ntBASIC4.21□□□□□ -1.74
CIITAP33076 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.21□□□□□ -1.74
CIITAP33076 OR4A45P-201ENST00000529954 901 ntBASIC4.21□□□□□ -1.74
CIITAP33076 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.21□□□□□ -1.74
CIITAP33076 MIR548AB-201ENST00000584917 84 ntBASIC4.21□□□□□ -1.74
CIITAP33076 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.21□□□□□ -1.74
CIITAP33076 VN1R79P-201ENST00000593540 513 ntBASIC4.21□□□□□ -1.74
CIITAP33076 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.21□□□□□ -1.74
CIITAP33076 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.21□□□□□ -1.74
CIITAP33076 AC244505.7-201ENST00000599675 272 ntBASIC4.21□□□□□ -1.74
CIITAP33076 AL355812.1-201ENST00000603215 216 ntBASIC4.21□□□□□ -1.74
CIITAP33076 AP000403.1-201ENST00000603349 851 ntBASIC4.21□□□□□ -1.74
CIITAP33076 RNU6-88P-201ENST00000606801 100 ntBASIC4.21□□□□□ -1.74
CIITAP33076 Z99129.1-201ENST00000612510 255 ntBASIC4.21□□□□□ -1.74
CIITAP33076 AC015540.1-201ENST00000615828 501 ntBASIC4.21□□□□□ -1.74
CIITAP33076 AL359715.5-201ENST00000623431 443 ntBASIC4.21□□□□□ -1.74
CIITAP33076 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.21□□□□□ -1.74
CIITAP33076 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CIITAP33076 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CIITAP33076 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CIITAP33076 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CIITAP33076 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.21□□□□□ -1.74
CIITAP33076 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CIITAP33076 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CIITAP33076 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CIITAP33076 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CIITAP33076 XIAPP3-201ENST00000312918 795 ntBASIC4.2□□□□□ -1.74
CIITAP33076 Y_RNA.97-201ENST00000363094 102 ntBASIC4.2□□□□□ -1.74
CIITAP33076 RNU6-777P-201ENST00000364265 104 ntBASIC4.2□□□□□ -1.74
CIITAP33076 RNA5SP51-201ENST00000364750 119 ntBASIC4.2□□□□□ -1.74
CIITAP33076 ARF4P3-201ENST00000397387 509 ntBASIC4.2□□□□□ -1.74
CIITAP33076 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.2□□□□□ -1.74
CIITAP33076 RNU6-648P-201ENST00000410190 107 ntBASIC4.2□□□□□ -1.74
CIITAP33076 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.2□□□□□ -1.74
CIITAP33076 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.2□□□□□ -1.74
CIITAP33076 RPL7P30-201ENST00000420888 709 ntBASIC4.2□□□□□ -1.74
CIITAP33076 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.2□□□□□ -1.74
CIITAP33076 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.2□□□□□ -1.74
CIITAP33076 MTCYBP1-201ENST00000454315 1119 ntBASIC4.2□□□□□ -1.74
CIITAP33076 MTCO3P2-201ENST00000457365 171 ntBASIC4.2□□□□□ -1.74
CIITAP33076 AC091564.1-201ENST00000464563 479 ntBASIC4.2□□□□□ -1.74
CIITAP33076 AC091153.1-201ENST00000466297 402 ntBASIC4.2□□□□□ -1.74
CIITAP33076 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.2□□□□□ -1.74
CIITAP33076 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.2□□□□□ -1.74
CIITAP33076 HIGD1AP3-201ENST00000515857 278 ntBASIC4.2□□□□□ -1.74
CIITAP33076 Vault.1-201ENST00000516474 102 ntBASIC4.2□□□□□ -1.74
CIITAP33076 RN7SKP209-201ENST00000516888 304 ntBASIC4.2□□□□□ -1.74
CIITAP33076 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.2□□□□□ -1.74
CIITAP33076 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.2□□□□□ -1.74
CIITAP33076 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.2□□□□□ -1.74
CIITAP33076 AGGF1P8-201ENST00000562979 1000 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms